RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 WDR31Q8NA23 367 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 OR9Q2Q8NGE9 314 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 GNPDA2Q8TDQ7 276 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 CANT1Q8WVQ1 401 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 LRR1Q96L50 414 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 KATNB1Q9BVA0 655 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 CHID1Q9BWS9 393 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 LRMDAQ9H2I8 198 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 TXNIPQ9H3M7 391 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 LIME1Q9H400 295 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 NPAP1Q9NZP6 1156 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 GRHPRQ9UBQ7 328 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 SLC7A8Q9UHI5 535 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 EDARQ9UNE0 448 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 PLEKHA6Q9Y2H5 1048 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 RNF115Q9Y4L5 304 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 MAGED1Q9Y5V3 778 aaPredicted RBP11.23□□□□□ -0.61
CDT1-203ENST00000569140 LYVE1Q9Y5Y7 322 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 SLC25A15Q9Y619 301 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 FLNBO75369 2602 aaKnown RBP11.23□□□□□ -0.61
CDT1-203ENST00000569140 FAM221AA4D161 298 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 ZNF99A8MXY4 864 aaPredicted RBP11.22□□□□□ -0.61
CDT1-203ENST00000569140 RPL36A-HNRNPH2H7BZ11 118 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 H7C1C5 153 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 XKRYO14609 159 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 ABCD4O14678 606 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 TRMUO75648 421 aaKnown RBP11.22□□□□□ -0.61
CDT1-203ENST00000569140 NDUFB2O95178 105 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 PLAUP00749 431 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 CD79AP11912 226 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 MAGEA2P43356 314 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 LIMS1P48059 325 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 ZNF84P51523 738 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 LCN6P62502 163 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 CACNA1DQ01668 2161 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 NPRL3Q12980 569 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 KEAP1Q14145 624 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 NCMAPQ5T1S8 102 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 OR2T5Q6IEZ7 315 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 TMEM108Q6UXF1 575 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 NHLRC1Q6VVB1 395 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 OR2T29Q8NH02 315 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 NSMAFQ92636 917 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 BCL2L2Q92843 193 aaPredicted RBP11.22□□□□□ -0.61
CDT1-203ENST00000569140 TMEM54Q969K7 222 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 ZNF570Q96NI8 536 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 TSPAN32Q96QS1 320 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 FOXB1Q99853 325 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 KCNS3Q9BQ31 491 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 YY1AP1Q9H869 796 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 POU2F3Q9UKI9 436 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 ZNF346Q9UL40 294 aaKnown RBP11.22□□□□□ -0.61
CDT1-203ENST00000569140 ADAM18Q9Y3Q7 739 aa11.22□□□□□ -0.61
CDT1-203ENST00000569140 CELSR2Q9HCU4 2923 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 SETXQ7Z333 2677 aaKnown RBP11.21□□□□□ -0.61
CDT1-203ENST00000569140 TEX13CA0A0J9YWL9 993 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 A0A1W2PPR1 153 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 DPRXA6NFQ7 191 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 A6NIZ1 184 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 ARHGEF9O43307 516 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 DHHO43323 396 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 E2F6O75461 281 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 SLC2A10O95528 541 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 NR2C1P13056 603 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 DNASE1P24855 282 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 RAP1BP61224 184 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 RAP1AP62834 184 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 FMODQ06828 376 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 ARMC4Q5T2S8 1044 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 FAM205BPQ63HN1 556 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 PGBD2Q6P3X8 592 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 SMARCD3Q6STE5 483 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 SLC22A25Q6T423 547 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 ZER1Q7Z7L7 766 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 LRRC75AQ8NAA5 344 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 AQP11Q8NBQ7 271 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 KBTBD8Q8NFY9 601 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 NANOS1Q8WY41 292 aaKnown RBP11.21□□□□□ -0.61
CDT1-203ENST00000569140 AKAP1Q92667 903 aaKnown RBP eCLIP11.21□□□□□ -0.61
CDT1-203ENST00000569140 HTRA1Q92743 480 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 HDAC2Q92769 488 aaKnown RBP11.21□□□□□ -0.61
CDT1-203ENST00000569140 MCHR2Q969V1 340 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 RADILQ96JH8 1075 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 GPA33Q99795 319 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 FUZQ9BT04 418 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 MMADHCQ9H3L0 296 aaPredicted RBP11.21□□□□□ -0.61
CDT1-203ENST00000569140 CCM2LQ9NUG4 571 aaPredicted RBP11.21□□□□□ -0.61
CDT1-203ENST00000569140 VNN3Q9NY84 501 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 SIGLEC7Q9Y286 467 aa11.21□□□□□ -0.61
CDT1-203ENST00000569140 A0A1W2PPL8 197 aa11.2□□□□□ -0.62
CDT1-203ENST00000569140 SOCS2O14508 198 aa11.2□□□□□ -0.62
CDT1-203ENST00000569140 FKBP6O75344 327 aa11.2□□□□□ -0.62
CDT1-203ENST00000569140 FARS2O95363 451 aaKnown RBP11.2□□□□□ -0.62
CDT1-203ENST00000569140 PPP1R3DO95685 299 aa11.2□□□□□ -0.62
CDT1-203ENST00000569140 IGHMP01871 453 aa11.2□□□□□ -0.62
CDT1-203ENST00000569140 CD14P08571 375 aa11.2□□□□□ -0.62
CDT1-203ENST00000569140 TSPAN19P0C672 248 aa11.2□□□□□ -0.62
CDT1-203ENST00000569140 FPR3P25089 353 aa11.2□□□□□ -0.62
CDT1-203ENST00000569140 PTAFRP25105 342 aa11.2□□□□□ -0.62
CDT1-203ENST00000569140 LOXP28300 417 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms