RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 LCKP06239 509 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 RNASE1P07998 156 aaKnown RBP10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 HNRNPCL4P0DMR1 293 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 CBLP22681 906 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 ZFP36P26651 326 aaKnown RBP10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 CRATP43155 626 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 CSNK1A1P48729 337 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 ATP4BP51164 291 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 MVDP53602 400 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 NME5P56597 212 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 UFM1P61960 85 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 LCN2P80188 198 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 BAMBIQ13145 260 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 MOGQ16653 247 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 PDCD4Q53EL6 469 aaKnown RBP10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 ARMCX4Q5H9R4 360 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 PIWIL3Q7Z3Z3 882 aaKnown RBP10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 NUDCD3Q8IVD9 361 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 WDFY1Q8IWB7 410 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 LSMEM1Q8N8F7 131 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 SCAIQ8N9R8 606 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 ZNF519Q8TB69 540 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 DNAJA4Q8WW22 397 aaPredicted RBP10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 C11orf40Q8WZ69 217 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 SLC25A28Q96A46 364 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 ELMOD3Q96FG2 381 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 SLC41A3Q96GZ6 507 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 TMEM19Q96HH6 336 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 BCL2L14Q9BZR8 327 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 CDH20Q9HBT6 801 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 THUMPD1Q9NXG2 353 aaKnown RBP10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 PLEK2Q9NYT0 353 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 NUP50Q9UKX7 468 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 CACNG2Q9Y698 323 aa10.03□□□□□ -0.8
GTF3C1-209ENST00000568569 A0A1B0GWA3 101 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 ISPDA4D126 451 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 MS4A18H0YCH9 400 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 CLDN34H7C241 214 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 FOXH1O75593 365 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 SNAP29O95721 258 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 SERPINE1P05121 402 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 PATE4P0C8F1 98 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 OR8G3PP0DMU2 310 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 IL12AP29459 219 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 SLC3A1Q07837 685 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 PUDPQ08623 228 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 TSTQ16762 297 aaKnown RBP10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 MS4A18Q3C1V0 323 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 ALG10BQ5I7T1 473 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 FAM209AQ5JX71 171 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 OGFOD2Q6N063 350 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 SKA3Q8IX90 412 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 KIRREL3Q8IZU9 778 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 MIER2Q8N344 545 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 PAQR4Q8N4S7 273 aaPredicted RBP10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 DEFB108BQ8NET1 73 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 OR6S1Q8NH40 331 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 FGFBP3Q8TAT2 258 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 ST7LQ8TDW4 575 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 CCL17Q92583 94 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 TRIM44Q96DX7 344 aaPredicted RBP10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 TXNDC15Q96J42 360 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 C1orf147Q96MC9 270 aaPredicted RBP10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 ZBTB18Q99592 522 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 EPYCQ99645 322 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 ASPNQ9BXN1 380 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 NUF2Q9BZD4 464 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 OR51B6Q9H340 312 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 C1orf198Q9H425 327 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 AIG1Q9NVV5 245 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 UBAP1Q9NZ09 502 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 ZNF69Q9UC07 566 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 RAP2CQ9Y3L5 183 aa10.02□□□□□ -0.81
GTF3C1-209ENST00000568569 PTHP01270 115 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 ALDOCP09972 364 aaKnown RBP10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 CCL2P13500 99 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 DRD4P21917 467 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 ETV4P43268 484 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 RPL14P50914 215 aaKnown RBP10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 UCP2P55851 309 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 ABCE1P61221 599 aaKnown RBP10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 ERVS71-1P61550 626 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 PMS2P3Q13401 168 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 TBC1D28Q2M2D7 210 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 FAM91A1Q658Y4 838 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 NHLRC1Q6VVB1 395 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 ZNF771Q7L3S4 317 aaPredicted RBP10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 PXKQ7Z7A4 578 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 DPPA2Q7Z7J5 298 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 SLC22A24Q8N4F4 322 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 ICA1LQ8NDH6 482 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 CPEB3Q8NE35 698 aaKnown RBP10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 GTF3AQ92664 365 aaKnown RBP10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 PKNOX2Q96KN3 472 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 MEAF6Q9HAF1 191 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 TPT1P8Q9HAU6 139 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 TCF7L2Q9NQB0 619 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 SLC6A13Q9NSD5 602 aa10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 MRPL39Q9NYK5 338 aaKnown RBP10.01□□□□□ -0.81
GTF3C1-209ENST00000568569 LGALS13Q9UHV8 139 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms