RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SLC22A3O75751 556 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 BCL10O95999 233 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 IL6P05231 212 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 ZCCHC18P0CG32 403 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 KITP10721 976 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 AHCYP23526 432 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 LSP1P33241 339 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 BIDP55957 195 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 PRSS12P56730 875 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 PUDPQ08623 228 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 ZP4Q12836 540 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 PDCD4Q53EL6 469 aaKnown RBP13.19□□□□□ -0.3
PALB2-205ENST00000567003 C6orf10Q5SRN2 563 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 DCAF12L2Q5VW00 463 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 TMEM154Q6P9G4 183 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 WDR88Q6ZMY6 472 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 USP51Q70EK9 711 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 NET1Q7Z628 596 aaPredicted RBP13.19□□□□□ -0.3
PALB2-205ENST00000567003 C10orf53Q8N6V4 93 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 GLB1L3Q8NCI6 653 aaPredicted RBP13.19□□□□□ -0.3
PALB2-205ENST00000567003 ICA1LQ8NDH6 482 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 BBS10Q8TAM1 723 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 SH3GL3Q99963 347 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 PAIP2Q9BPZ3 127 aaKnown RBP13.19□□□□□ -0.3
PALB2-205ENST00000567003 WFDC6Q9BQY6 131 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 ZNF747Q9BV97 191 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 ASPNQ9BXN1 380 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 BCL2L10Q9HD36 194 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 A4GALTQ9NPC4 353 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 OPN4Q9UHM6 478 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 WIPI2Q9Y4P8 454 aa13.19□□□□□ -0.3
PALB2-205ENST00000567003 C11orf98E9PRG8 122 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 PLPP3O14495 311 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 PRSS23O95084 383 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 FSHBP01225 129 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 SERPINA5P05154 406 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 LCKP06239 509 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 ANPEPP15144 967 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 KLF3P57682 345 aaPredicted RBP13.18□□□□□ -0.3
PALB2-205ENST00000567003 RGNQ15493 299 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 TSTQ16762 297 aaKnown RBP13.18□□□□□ -0.3
PALB2-205ENST00000567003 KRT71Q3SY84 523 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 PDLIM3Q53GG5 364 aaPredicted RBP13.18□□□□□ -0.3
PALB2-205ENST00000567003 C5orf46Q6UWT4 87 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 C10orf111Q8N326 155 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 SIGLECL1Q8N7X8 197 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 LSMEM1Q8N8F7 131 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 SCAIQ8N9R8 606 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 SLC30A7Q8NEW0 376 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 NFKBIDQ8NI38 313 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 SYNPRQ8TBG9 265 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 SNX33Q8WV41 574 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 DNAJA4Q8WW22 397 aaPredicted RBP13.18□□□□□ -0.3
PALB2-205ENST00000567003 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.18□□□□□ -0.3
PALB2-205ENST00000567003 TAF15Q92804 592 aaKnown RBP eCLIP13.18□□□□□ -0.3
PALB2-205ENST00000567003 SLC35B4Q969S0 331 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 RAB39BQ96DA2 213 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 ITCHQ96J02 903 aa13.18□□□□□ -0.3
PALB2-205ENST00000567003 VWFP04275 2813 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 IGLV3-9A0A075B6K5 115 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 IGHV1-69-2A0A0G2JMI3 117 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 C5orf58C9J3I9 102 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 TPD52L2O43399 206 aaKnown RBP13.17□□□□□ -0.3
PALB2-205ENST00000567003 TPST2O60704 377 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 ARAFP10398 606 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 MAKP20794 623 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 PRKAR1BP31321 381 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 RBMXP38159 391 aaKnown RBP13.17□□□□□ -0.3
PALB2-205ENST00000567003 RAD52P43351 418 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 LCN2P80188 198 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 DEFA6Q01524 100 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 RBBP4Q09028 425 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 MELKQ14680 651 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 OR1Q1Q15612 314 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 LCE2DQ5TA82 110 aaPredicted RBP13.17□□□□□ -0.3
PALB2-205ENST00000567003 SLC2A7Q6PXP3 512 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 SLC22A24Q8N4F4 322 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 TEX29Q8N6K0 151 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 NANPQ8TBE9 248 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 AENQ8WTP8 325 aaKnown RBP13.17□□□□□ -0.3
PALB2-205ENST00000567003 TMEM54Q969K7 222 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 SLC47A1Q96FL8 570 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 PAIP1Q9H074 479 aaKnown RBP13.17□□□□□ -0.3
PALB2-205ENST00000567003 DENND2DQ9H6A0 471 aaPredicted RBP13.17□□□□□ -0.3
PALB2-205ENST00000567003 C7orf69Q9H7B7 122 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 ZNF696Q9H7X3 374 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 RMND5AQ9H871 391 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 CDH20Q9HBT6 801 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 KCNK9Q9NPC2 374 aa13.17□□□□□ -0.3
PALB2-205ENST00000567003 MRPL39Q9NYK5 338 aaKnown RBP13.17□□□□□ -0.3
PALB2-205ENST00000567003 A0A0B4J2E0 115 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 A0A1B0GX12 115 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 CLDN25C9JDP6 229 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 J3QLI3 93 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 TM9SF1O15321 606 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 HDAC3O15379 428 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 RGS16O15492 202 aaPredicted RBP13.16□□□□□ -0.3
PALB2-205ENST00000567003 HKR1P10072 659 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 IDO1P14902 403 aa13.16□□□□□ -0.3
PALB2-205ENST00000567003 ZNF250P15622 560 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms