RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 MSMPQ1L6U9 139 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 HSP90B2PQ58FF3 399 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 CLEC2AQ6UVW9 174 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 SKA3Q8IX90 412 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 OR4F15Q8NGB8 312 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 RP9Q8TA86 221 aaKnown RBP12.68□□□□□ -0.38
FANCA-220ENST00000566409 C10orf105Q8TEF2 133 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 FOXB1Q99853 325 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 PLK3Q9H4B4 646 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 MED4Q9NPJ6 270 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 B3GAT2Q9NPZ5 323 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 GLTPQ9NZD2 209 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 POFUT2Q9Y2G5 429 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 SNX13Q9Y5W8 968 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 ELOVL7A1L3X0 281 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 B9A039 149 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 BLOC1S5-TXNDC5H3BN57 136 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 NME4O00746 187 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 PDE5AO76074 875 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 F13BP05160 661 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 IGFBP1P08833 259 aaPredicted RBP12.67□□□□□ -0.38
FANCA-220ENST00000566409 TSPAN19P0C672 248 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 PATE4P0C8F1 98 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 PGA4P0DJD7 388 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 PGA3P0DJD8 388 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 UMPSP11172 480 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 CD79AP11912 226 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 BMP4P12644 408 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 RBM34P42696 430 aaKnown RBP12.67□□□□□ -0.38
FANCA-220ENST00000566409 DSCR9P59020 149 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 SELENOWP63302 87 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 RPL18Q07020 188 aaKnown RBP12.67□□□□□ -0.38
FANCA-220ENST00000566409 HIST3H3Q16695 136 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 GSG1Q2KHT4 349 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 LRRC23Q53EV4 343 aaPredicted RBP12.67□□□□□ -0.38
FANCA-220ENST00000566409 C8orf82Q6P1X6 216 aaPredicted RBP12.67□□□□□ -0.38
FANCA-220ENST00000566409 ZNF584Q8IVC4 421 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 ANKS4BQ8N8V4 417 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 TMEM239Q8WW34 195 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 FAM168AQ92567 244 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 SLC25A44Q96H78 314 aaPredicted RBP12.67□□□□□ -0.38
FANCA-220ENST00000566409 TPD52L3Q96J77 140 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 DOK1Q99704 481 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 MRPL13Q9BYD1 178 aaKnown RBP12.67□□□□□ -0.38
FANCA-220ENST00000566409 POLR2J2Q9GZM3 115 aaKnown RBP12.67□□□□□ -0.38
FANCA-220ENST00000566409 POLR2J3Q9H1A7 115 aaKnown RBP12.67□□□□□ -0.38
FANCA-220ENST00000566409 ZNF442Q9H7R0 627 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 A4GNTQ9UNA3 340 aa12.67□□□□□ -0.38
FANCA-220ENST00000566409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.67□□□□□ -0.383e-24■■■■■ 28.4
FANCA-220ENST00000566409 KIAA1324LA8MWY0 1029 aaPredicted RBP12.66□□□□□ -0.38
FANCA-220ENST00000566409 CD5LO43866 347 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 PIP5K1CO60331 668 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 OR7A10O76100 309 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 IGF2P01344 180 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 IFNA14P01570 189 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 HIST1H2ABP04908 130 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 ZNF35P13682 527 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 AQP2P41181 271 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 GIPRP48546 466 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 SNRPD2P62316 118 aaKnown RBP12.66□□□□□ -0.38
FANCA-220ENST00000566409 PPP2R2BQ00005 443 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 LIPEQ05469 1076 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 LOXL1Q08397 574 aaPredicted RBP12.66□□□□□ -0.38
FANCA-220ENST00000566409 KRT80Q6KB66 452 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 HIST3H2AQ7L7L0 130 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 NANOGNBQ7Z5D8 188 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 VTCN1Q7Z7D3 282 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 ZCCHC24Q8N2G6 241 aaKnown RBP12.66□□□□□ -0.38
FANCA-220ENST00000566409 MOSPD2Q8NHP6 518 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 LIPHQ8WWY8 451 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 HIST1H2ACQ93077 130 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 ZNF566Q969W8 418 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 SGTBQ96EQ0 304 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 TNFRSF13CQ96RJ3 184 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 SEPHS2Q99611 448 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 DNHD1Q96M86 4753 aa12.66□□□□□ -0.38
FANCA-220ENST00000566409 VWC2LB2RUY7 222 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 FFAR1O14842 300 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 CRLF1O75462 422 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 BCL10O95999 233 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 QDPRP09417 244 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 THRBP10828 461 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 NPR2P20594 1047 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 NR4A1P22736 598 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 YAP1P46937 504 aaKnown RBP12.65□□□□□ -0.38
FANCA-220ENST00000566409 PTDSS1P48651 473 aaKnown RBP12.65□□□□□ -0.38
FANCA-220ENST00000566409 SLC7A2P52569 658 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 RAB1AP62820 205 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 DAG1Q14118 895 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 LAPTM4AQ15012 233 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 TMEM249Q2WGJ8 235 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 ARMC4Q5T2S8 1044 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 PIWIL3Q7Z3Z3 882 aaKnown RBP12.65□□□□□ -0.38
FANCA-220ENST00000566409 SVOPLQ8N434 492 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 SLC22A24Q8N4F4 322 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 IL17RDQ8NFM7 739 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 ASB10Q8WXI3 467 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 ZNF347Q96SE7 839 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 SH3GL3Q99963 347 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 VRK1Q99986 396 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms