RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 POU3F1Q03052 451 aaPredicted RBP17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 C1DQ13901 141 aaKnown RBP17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 RNFT1Q5M7Z0 435 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 TRILQ7L0X0 811 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 CYB561A3Q8NBI2 242 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 BBS1Q8NFJ9 593 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 ASB10Q8WXI3 467 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 SGCDQ92629 289 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 CPNE4Q96A23 557 aaPredicted RBP17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 TEAD3Q99594 435 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 RHNO1Q9BSD3 238 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 CDCA4Q9BXL8 241 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 LDAHQ9H6V9 325 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 MOKQ9UQ07 419 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 EXOGQ9Y2C4 368 aaKnown RBP17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 MYO9AB2RTY4 2548 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 UTP20O75691 2785 aaKnown RBP17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 OR6C68A6NDL8 312 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 ARHGEF9O43307 516 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 FADS2O95864 444 aaKnown RBP17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 MT-ND2P03891 347 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 STSP08842 583 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 IFNGR1P15260 489 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 ZNF43P17038 809 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 DCKP27707 260 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 CENPAP49450 140 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 SUCLG1P53597 346 aaKnown RBP17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 POU4F2Q12837 409 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 PON3Q15166 354 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 KLHL12Q53G59 568 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 VASNQ6EMK4 673 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 NHLRC1Q6VVB1 395 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 KCTD8Q6ZWB6 473 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 KDM8Q8N371 416 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 RBMXL3Q8N7X1 1067 aaKnown RBP17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 OR2T4Q8NH00 348 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 OR10D3Q8NH80 312 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 LGALS12Q96DT0 336 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 ADAD1Q96M93 576 aaKnown RBP17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 HCAR1Q9BXC0 346 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 DEFB127Q9H1M4 99 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 OR51V1Q9H2C8 321 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 EXO5Q9H790 373 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 MED20Q9H944 212 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 VSX1Q9NZR4 365 aaPredicted RBP17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 LUZP4Q9P127 313 aa17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 DIMT1Q9UNQ2 313 aaKnown RBP17.03■□□□□ 0.32
CSPG4P13-201ENST00000565545 MED12Q93074 2177 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 PRSS37A4D1T9 235 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 CCDC182A6NF36 153 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 CENPBD1B2RD01 187 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 SERPINI2O75830 405 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 RAB36O95755 333 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 HLA-DOBP13765 273 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 EIF1AXP47813 144 aaKnown RBP17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 ALDH3B2P48448 385 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 RPS7P62081 194 aaKnown RBP17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 PIGFQ07326 219 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 EIF2S3LQ2VIR3 472 aaKnown RBP17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 UBQLNLQ8IYU4 475 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 OR52I1Q8NGK6 324 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 PRR7Q8TB68 274 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 FCGR1BQ92637 280 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 TUBA1CQ9BQE3 449 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 ALG12Q9BV10 488 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 SRXN1Q9BYN0 137 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 B3GNT3Q9Y2A9 372 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 FKBP7Q9Y680 259 aa17.02■□□□□ 0.32
CSPG4P13-201ENST00000565545 CREBBPQ92793 2442 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 A0A1B0GVC2 190 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 ZNF814B7Z6K7 855 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 TRAF3IP2O43734 574 aaPredicted RBP17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 CXCL13O43927 109 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 GLCEO94923 617 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 CPN1P15169 458 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 SPI1P17947 270 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 PCMT1P22061 227 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 C21orf33P30042 268 aaPredicted RBP17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 ATP6V1E1P36543 226 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 BLVRAP53004 296 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 CLDN15P56746 228 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 PMP22Q01453 160 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 EMX1Q04741 257 aaPredicted RBP17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 GGTLC2Q14390 218 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 IRF3Q14653 427 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 TBCEQ15813 527 aaPredicted RBP17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 GTF2IRD2BQ6EKJ0 949 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 GPAT4Q86UL3 456 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 GTF2IRD2Q86UP8 949 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 OR9Q1Q8NGQ5 310 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 OR6X1Q8NH79 312 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 FNDC8Q8TC99 324 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 JAM3Q9BX67 310 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 TSPAN10Q9H1Z9 355 aaPredicted RBP17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 RPRD1BQ9NQG5 326 aaKnown RBP17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 NDUFA13Q9P0J0 144 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 EXOSC1Q9Y3B2 195 aaKnown RBP17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 UNC79Q9P2D8 2635 aa17.01■□□□□ 0.31
CSPG4P13-201ENST00000565545 H0YC42 278 aa17■□□□□ 0.31
CSPG4P13-201ENST00000565545 SMAD9O15198 467 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms