RNA–Protein interactions for RNA: ENST00000565140.5

CLN3-214, Transcript of CLN3, battenin, humanhuman

TSL 2

Gene CLN3, Length 1,225 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-214ENST00000565140 PIGFQ07326 219 aa15.95■□□□□ 0.14
CLN3-214ENST00000565140 RAB35Q15286 201 aa15.95■□□□□ 0.14
CLN3-214ENST00000565140 CCDC36Q8IYA8 594 aa15.95■□□□□ 0.14
CLN3-214ENST00000565140 LZICQ8WZA0 190 aa15.95■□□□□ 0.14
CLN3-214ENST00000565140 FBXO17Q96EF6 278 aa15.95■□□□□ 0.14
CLN3-214ENST00000565140 SLC25A44Q96H78 314 aaPredicted RBP15.95■□□□□ 0.14
CLN3-214ENST00000565140 REG4Q9BYZ8 158 aa15.95■□□□□ 0.14
CLN3-214ENST00000565140 BARX1Q9HBU1 254 aaPredicted RBP15.95■□□□□ 0.14
CLN3-214ENST00000565140 MOV10Q9HCE1 1003 aaKnown RBP15.95■□□□□ 0.14
CLN3-214ENST00000565140 CA10Q9NS85 328 aa15.95■□□□□ 0.14
CLN3-214ENST00000565140 GLTPQ9NZD2 209 aa15.95■□□□□ 0.14
CLN3-214ENST00000565140 IGHV2OR16-5A0A0B4J2B6 119 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 H7C417 338 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 J3KTA2 159 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 FFAR1O14842 300 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 GSTA4O15217 222 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 PIP5K1CO60331 668 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 ZNF682O95780 498 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 BCL10O95999 233 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 IGF2P01344 180 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 TSPAN19P0C672 248 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 PGA4P0DJD7 388 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 PGA3P0DJD8 388 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 AQP2P41181 271 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 CHRNB3Q05901 458 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 RUNX1T1Q06455 604 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 ST3GAL3Q11203 375 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 NPRL3Q12980 569 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 LAPTM4AQ15012 233 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 MOSPD2Q8NHP6 518 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 LIPHQ8WWY8 451 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 ZNF566Q969W8 418 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 CMTM5Q96DZ9 223 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 PRRC1Q96M27 445 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 ZNF75AQ96N20 296 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 FOXB1Q99853 325 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 MAN2C1Q9NTJ4 1040 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 RHCGQ9UBD6 479 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 MED31Q9Y3C7 131 aa15.94■□□□□ 0.14
CLN3-214ENST00000565140 GMNCA6NCL1 334 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 CD79AP11912 226 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 NCK1P16333 377 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 SERPINF1P36955 418 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 NUDT6P53370 316 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 PSME3P61289 254 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 KRTAP1-1Q07627 177 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 ADIPOQQ15848 244 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 GSG1Q2KHT4 349 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 VHLLQ6RSH7 139 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 CBLL1Q75N03 491 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 CPLX4Q7Z7G2 160 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 SKA3Q8IX90 412 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 FGFBP3Q8TAT2 258 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 MS4A3Q96HJ5 214 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 ABCD2Q9UBJ2 740 aa15.93■□□□□ 0.14
CLN3-214ENST00000565140 IGHV4-30-2A0A087WSY4 118 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 LY6HO94772 140 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 SERPINA1P01009 418 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 IFNW1P05000 195 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 QDPRP09417 244 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 OR4A8P0C604 315 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 PATE4P0C8F1 98 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 ZNF14P17017 642 aaPredicted RBP15.92■□□□□ 0.14
CLN3-214ENST00000565140 PRDX6P30041 224 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 THBS4P35443 961 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 HIST3H3Q16695 136 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 PIWIL3Q7Z3Z3 882 aaKnown RBP15.92■□□□□ 0.14
CLN3-214ENST00000565140 TSEN54Q7Z6J9 526 aaKnown RBP15.92■□□□□ 0.14
CLN3-214ENST00000565140 MEX3DQ86XN8 651 aaKnown RBP15.92■□□□□ 0.14
CLN3-214ENST00000565140 RBM15BQ8NDT2 890 aaKnown RBP15.92■□□□□ 0.14
CLN3-214ENST00000565140 OR4F15Q8NGB8 312 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 ASB10Q8WXI3 467 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 HSH2DQ96JZ2 352 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 ZNF347Q96SE7 839 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 KCTD14Q9BQ13 255 aaPredicted RBP15.92■□□□□ 0.14
CLN3-214ENST00000565140 MRPL13Q9BYD1 178 aaKnown RBP15.92■□□□□ 0.14
CLN3-214ENST00000565140 INIPQ9NRY2 104 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 PMF1-BGLAPU3KQ54 211 aa15.92■□□□□ 0.14
CLN3-214ENST00000565140 A0A1W2PRG6 482 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 DHHO43323 396 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 PRSS23O95084 383 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 BMP4P12644 408 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 IFI30P13284 250 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 MAKP20794 623 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 RAB1AP62820 205 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 MYBPC1Q00872 1141 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 IFI44LQ53G44 452 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 OFCC1Q8IZS5 231 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 ZNF525Q8N782 197 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 SYT14Q8NB59 555 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 NUP37Q8NFH4 326 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 OR10H5Q8NGA6 315 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 GEMIN6Q8WXD5 167 aaKnown RBP15.91■□□□□ 0.14
CLN3-214ENST00000565140 MCHR2Q969V1 340 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 FAM162AQ96A26 154 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 BPIFA2Q96DR5 249 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 SEPHS2Q99611 448 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 SH3GL3Q99963 347 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 RHNO1Q9BSD3 238 aa15.91■□□□□ 0.14
CLN3-214ENST00000565140 FNDC11Q9BVV2 318 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms