RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 KRT33BQ14525 404 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 CST6Q15828 149 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 TMIEQ8NEW7 156 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 OR4C6Q8NH72 309 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 GRHL3Q8TE85 626 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 PPP1R1CQ8WVI7 109 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 TMED6Q8WW62 240 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 SLC35A4Q96G79 324 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 CLCC1Q96S66 551 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 OR51M1Q9H341 326 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 KLHL28Q9NXS3 571 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 TNFSF18Q9UNG2 199 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 RIIAD1A6NNX1 92 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 ZNF749O43361 778 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 BCL2L11O43521 198 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 OR4E1P0C645 316 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 RIPPLY1Q0D2K3 151 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 SGCAQ16586 387 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 GLT8D1Q68CQ7 371 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 CDPF1Q6NVV7 123 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 FIP1L1Q6UN15 594 aaKnown RBP14.84□□□□□ -0.03
LINC00554-201ENST00000564841 GTPBP8Q8N3Z3 284 aaPredicted RBP14.84□□□□□ -0.03
LINC00554-201ENST00000564841 C19orf43Q9BQ61 176 aa14.84□□□□□ -0.03
LINC00554-201ENST00000564841 ZMAT3Q9HA38 289 aaKnown RBP14.84□□□□□ -0.03
LINC00554-201ENST00000564841 MDC1Q14676 2089 aaKnown RBP14.83□□□□□ -0.03
LINC00554-201ENST00000564841 ZNF879B4DU55 563 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 SULT1B1O43704 296 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 GLSO94925 669 aaPredicted RBP14.83□□□□□ -0.04
LINC00554-201ENST00000564841 LAMP2P13473 410 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 AQP2P41181 271 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 NR0B2Q15466 257 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 GFOD2Q3B7J2 385 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 ZNF836Q6ZNA1 936 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 OR4N5Q8IXE1 308 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 NUP43Q8NFH3 380 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 CDS1Q92903 461 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 ISOC2Q96AB3 205 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 ACKR4Q9NPB9 350 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 TRAV18A0A075B6X5 111 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 TBC1D3DA0A087WVF3 549 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 TBC1D3IA0A087WXS9 549 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 TBC1D3EA0A087X179 549 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 TBC1D3KA0A087X1G2 549 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 A0A0D9SG52 128 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 A0A1W2PR48 441 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 TBC1D3FA6NER0 549 aaPredicted RBP14.83□□□□□ -0.04
LINC00554-201ENST00000564841 CCDC85CA6NKD9 419 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 TBC1D3LB9A6J9 549 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 TBC1D3HP0C7X1 549 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 NQO2P16083 231 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 ZNF136P52737 540 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 PEA15Q15121 130 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 ELAVL1Q15717 326 aaKnown RBP14.83□□□□□ -0.04
LINC00554-201ENST00000564841 TBC1D3GQ6DHY5 549 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 TBC1D3CQ6IPX1 549 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 FIGNL1Q6PIW4 674 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 TBC1D3Q8IZP1 549 aaPredicted RBP14.83□□□□□ -0.04
LINC00554-201ENST00000564841 ELP5Q8TE02 316 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 TMEM239Q8WW34 195 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 SELENOIQ9C0D9 397 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 LAT2Q9GZY6 243 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 HRH4Q9H3N8 390 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 FBXO34Q9NWN3 711 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 THAP10Q9P2Z0 257 aaPredicted RBP14.83□□□□□ -0.04
LINC00554-201ENST00000564841 STEAP1Q9UHE8 339 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 ZNF223Q9UK11 482 aaPredicted RBP14.83□□□□□ -0.04
LINC00554-201ENST00000564841 SIGLEC7Q9Y286 467 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 SLC35A3Q9Y2D2 325 aa14.83□□□□□ -0.04
LINC00554-201ENST00000564841 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.82□□□□□ -0.04
LINC00554-201ENST00000564841 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.82□□□□□ -0.04
LINC00554-201ENST00000564841 H7C417 338 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 MAPK3P27361 379 aaPredicted RBP14.82□□□□□ -0.04
LINC00554-201ENST00000564841 RAB5BP61020 215 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 ID2Q02363 134 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 CLINT1Q14677 625 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 ITPRIPL2Q3MIP1 535 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 OTPQ5XKR4 325 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 C11orf87Q6NUJ2 197 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 STAC2Q6ZMT1 411 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 RHOUQ7L0Q8 258 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 AMZ2Q86W34 360 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 MISPQ8IVT2 679 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 DND1Q8IYX4 353 aaKnown RBP14.82□□□□□ -0.04
LINC00554-201ENST00000564841 LINC01555Q8NAE3 123 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 OR51D1Q8NGF3 324 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 OR6N1Q8NGY5 312 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 ZPLD1Q8TCW7 415 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 BPIFA2Q96DR5 249 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 CNTNAP3BQ96NU0 1288 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 GAREM1Q9H706 876 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 UQCC1Q9NVA1 299 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 NCDNQ9UBB6 729 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 MTFP1Q9UDX5 166 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 CTNSO60931 367 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 APEHP13798 732 aaKnown RBP14.82□□□□□ -0.04
LINC00554-201ENST00000564841 ABOP16442 354 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 NTSP30990 170 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 SDHAP31040 664 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 LTBQ06643 244 aa14.82□□□□□ -0.04
LINC00554-201ENST00000564841 OR10AC1Q8NH08 325 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms