RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 NAAAQ02083 359 aa15.97■□□□□ 0.15
SYNGR3-204ENST00000564642 NPRL3Q12980 569 aa15.97■□□□□ 0.15
SYNGR3-204ENST00000564642 ETFDHQ16134 617 aa15.97■□□□□ 0.15
SYNGR3-204ENST00000564642 RRM2BQ7LG56 351 aa15.97■□□□□ 0.15
SYNGR3-204ENST00000564642 HDDC2Q7Z4H3 204 aa15.97■□□□□ 0.15
SYNGR3-204ENST00000564642 PGAM4Q8N0Y7 254 aa15.97■□□□□ 0.15
SYNGR3-204ENST00000564642 ANKS4BQ8N8V4 417 aa15.97■□□□□ 0.15
SYNGR3-204ENST00000564642 NANOS1Q8WY41 292 aaKnown RBP15.97■□□□□ 0.15
SYNGR3-204ENST00000564642 CCT8L2Q96SF2 557 aa15.97■□□□□ 0.15
SYNGR3-204ENST00000564642 SAMD4AQ9UPU9 718 aaKnown RBP15.97■□□□□ 0.15
SYNGR3-204ENST00000564642 FAM32AQ9Y421 112 aaKnown RBP15.97■□□□□ 0.15
SYNGR3-204ENST00000564642 USF3Q68DE3 2245 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 H7C1Q1 480 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 FFAR1O14842 300 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 SAGP10523 405 aaPredicted RBP15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 BMP4P12644 408 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 B4GALT1P15291 398 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 DAP3P51398 398 aaKnown RBP15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 IDH3GP51553 393 aaPredicted RBP15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 CHRNB3Q05901 458 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 LAPTM4AQ15012 233 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 CLEC12BQ2HXU8 276 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 C16orf89Q6UX73 402 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 ZNF730Q6ZMV8 503 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 ZNF627Q7L945 461 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 BIVMQ86UB2 503 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 MDP1Q86V88 176 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 RNF113BQ8IZP6 322 aaKnown RBP15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 MOSPD2Q8NHP6 518 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 ACOT11Q8WXI4 607 aaPredicted RBP15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 CDRT15Q96T59 188 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 CACNG6Q9BXT2 260 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 BARX1Q9HBU1 254 aaPredicted RBP15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 DCAF13Q9NV06 445 aaKnown RBP15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 NDE1Q9NXR1 346 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 ENPP4Q9Y6X5 453 aa15.96■□□□□ 0.15
SYNGR3-204ENST00000564642 ZNF503-AS2A6NEH8 195 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 TRIM64A6NGJ6 449 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 TRIM64BA6NI03 449 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 DHHO43323 396 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 ENTPD5O75356 428 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 HLA-HP01893 362 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 QDPRP09417 244 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 PGA4P0DJD7 388 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 PGA3P0DJD8 388 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 ACADSP16219 412 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 FUT4P22083 530 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 PRKCDQ05655 676 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 PIGFQ07326 219 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 GSG1Q2KHT4 349 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 SAMD4BQ5PRF9 694 aaKnown RBP15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 GKAP1Q5VSY0 366 aaPredicted RBP15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 C11orf71Q6IPW1 123 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 LRFN4Q6PJG9 635 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 PIWIL3Q7Z3Z3 882 aaKnown RBP15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 NRMQ8IXM6 262 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 FAM156AQ8NDB6 213 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 RBM15BQ8NDT2 890 aaKnown RBP15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 IL17RDQ8NFM7 739 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 OR4F15Q8NGB8 312 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 GSX1Q9H4S2 264 aaPredicted RBP15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 GORASP2Q9H8Y8 452 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 MAN2C1Q9NTJ4 1040 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 STX18Q9P2W9 335 aaKnown RBP15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 GDF2Q9UK05 429 aaPredicted RBP15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 HIF3AQ9Y2N7 669 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 PMF1-BGLAPU3KQ54 211 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 ABCA2Q9BZC7 2435 aa15.95■□□□□ 0.14
SYNGR3-204ENST00000564642 EFCAB9A8MZ26 197 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 CENPBD1B2RD01 187 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 SMAD7O15105 426 aaKnown RBP15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 IGHV4-39P01824 125 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 CELA3BP08861 270 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 TSPAN19P0C672 248 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 HSD17B1P14061 328 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 MAKP20794 623 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 CALCRP30988 508 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 MNAT1P51948 309 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 LSM11P83369 360 aaKnown RBP eCLIP15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 KRT72Q14CN4 511 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 RAB35Q15286 201 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 ALG10Q5BKT4 473 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 TBPL2Q6SJ96 375 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 OAFQ86UD1 273 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 CIARTQ8N365 385 aaPredicted RBP15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 ASB10Q8WXI3 467 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 ANKRD19PQ9H560 264 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 SEC61A2Q9H9S3 476 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 NMNAT1Q9HAN9 279 aaPredicted RBP15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 CA10Q9NS85 328 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 B3GNT2Q9NY97 397 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 MAGEL2Q9UJ55 1249 aa15.94■□□□□ 0.14
SYNGR3-204ENST00000564642 MAP1AP78559 2803 aaPredicted RBP15.93■□□□□ 0.14
SYNGR3-204ENST00000564642 A0A087WUU8 490 aa15.93■□□□□ 0.14
SYNGR3-204ENST00000564642 FAM171A2A8MVW0 826 aa15.93■□□□□ 0.14
SYNGR3-204ENST00000564642 VSTM5A8MXK1 200 aa15.93■□□□□ 0.14
SYNGR3-204ENST00000564642 NDUFS7O75251 213 aa15.93■□□□□ 0.14
SYNGR3-204ENST00000564642 TRMUO75648 421 aaKnown RBP15.93■□□□□ 0.14
SYNGR3-204ENST00000564642 PRSS23O95084 383 aa15.93■□□□□ 0.14
SYNGR3-204ENST00000564642 UBL3O95164 117 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms