RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 IQCCQ4KMZ1 466 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 ERICH5Q6P6B1 374 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 CALHM3Q86XJ0 350 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 CDK20Q8IZL9 346 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 ZCCHC24Q8N2G6 241 aaKnown RBP15.29■□□□□ 0.04
NME3-205ENST00000563854 PCYOX1LQ8NBM8 494 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 IL17RDQ8NFM7 739 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 OR6X1Q8NH79 312 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 TMEM255BQ8WV15 326 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 TMEM54Q969K7 222 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 ZNF566Q969W8 418 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 KCNK17Q96T54 332 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 PRSS27Q9BQR3 290 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 SLC19A3Q9BZV2 496 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 RAB1BQ9H0U4 201 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 GID8Q9NWU2 228 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 B3GNT2Q9NY97 397 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 GLTPQ9NZD2 209 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 CAPN7Q9Y6W3 813 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 ARFGEF3Q5TH69 2177 aa15.29■□□□□ 0.04
NME3-205ENST00000563854 ANK3Q12955 4377 aaKnown RBP15.29■□□□□ 0.04
NME3-205ENST00000563854 MCIDASD6RGH6 385 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 UBL3O95164 117 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 BCL10O95999 233 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 IGHV4-31P0DP07 118 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 NR4A2P43354 598 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 UGT2B15P54855 530 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 CLRN1P58418 232 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 RAB1AP62820 205 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 LSM11P83369 360 aaKnown RBP eCLIP15.28■□□□□ 0.04
NME3-205ENST00000563854 ZP4Q12836 540 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 CHRFAM7AQ494W8 412 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 COQ5Q5HYK3 327 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 GKAP1Q5VSY0 366 aaPredicted RBP15.28■□□□□ 0.04
NME3-205ENST00000563854 CYB5R2Q6BCY4 276 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 HIPK1Q86Z02 1210 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 NKAIN4Q8IVV8 208 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 POU5F2Q8N7G0 328 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 C10orf82Q8WW14 230 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 SLC25A44Q96H78 314 aaPredicted RBP15.28■□□□□ 0.04
NME3-205ENST00000563854 TPD52L3Q96J77 140 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 FOXN4Q96NZ1 517 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 ZNF426Q9BUY5 554 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 TPK1Q9H3S4 243 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 MEPEQ9NQ76 525 aaPredicted RBP15.28■□□□□ 0.04
NME3-205ENST00000563854 ZNF446Q9NWS9 450 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 ZNF224Q9NZL3 707 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 ARMCX1Q9P291 453 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 CMAHPQ9Y471 501 aa15.28■□□□□ 0.04
NME3-205ENST00000563854 LOC390937A0A1W2PQ73 354 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 FAM220BPB1ANY3 271 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 NDUFS8O00217 210 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 IFNA14P01570 189 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 F13BP05160 661 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 ASAH2BP0C7U1 165 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 APEHP13798 732 aaKnown RBP15.27■□□□□ 0.04
NME3-205ENST00000563854 ZNF14P17017 642 aaPredicted RBP15.27■□□□□ 0.04
NME3-205ENST00000563854 NR4A1P22736 598 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 MYBPC1Q00872 1141 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 GALK2Q01415 458 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 PIN1Q13526 163 aaPredicted RBP15.27■□□□□ 0.04
NME3-205ENST00000563854 RAB39AQ14964 217 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 CYBRD1Q53TN4 286 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 ZNF627Q7L945 461 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 SKA3Q8IX90 412 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 RCN3Q96D15 328 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 SGTBQ96EQ0 304 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 ZNF583Q96ND8 569 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 SH3GL3Q99963 347 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 BPESC1Q9GZL8 116 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 CHODLQ9H9P2 273 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 MYOZ1Q9NP98 299 aaPredicted RBP15.27■□□□□ 0.04
NME3-205ENST00000563854 RIMS3Q9UJD0 308 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 SPEF1Q9Y4P9 236 aa15.27■□□□□ 0.04
NME3-205ENST00000563854 IGHV4-61A0A0C4DH41 118 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 A0A1W2PRG6 482 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 VWC2LB2RUY7 222 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 DHHO43323 396 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 OR7A10O76100 309 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 OR5F1O95221 314 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 NPPAP01160 153 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 IGHG1P01857 330 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 MT-ND1P03886 318 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 ADRA2AP08913 450 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 QDPRP09417 244 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 PGA4P0DJD7 388 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 PGA3P0DJD8 388 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 DAOP14920 347 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 FUT1P19526 365 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 LSP1P33241 339 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 RPL18Q07020 188 aaKnown RBP15.26■□□□□ 0.03
NME3-205ENST00000563854 HSP90B2PQ58FF3 399 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 PIWIL3Q7Z3Z3 882 aaKnown RBP15.26■□□□□ 0.03
NME3-205ENST00000563854 SLC22A24Q8N4F4 322 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 SYT14Q8NB59 555 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 OR2T12Q8NG77 320 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 FGFBP3Q8TAT2 258 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 TMEM239Q8WW34 195 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 DOK1Q99704 481 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 SYT3Q9BQG1 590 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms