RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 NPIPB4C9JG80 1138 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 NPIPA5E9PKD4 350 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 H0YC42 278 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 SLC22A1O15245 554 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 LRRTM2O43300 516 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 GPANK1O95872 356 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 SP1P08047 785 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 OR2T7P0C7T2 308 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 ZNF12P17014 697 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 BMXP51813 675 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 RPS3AP61247 264 aaKnown RBP16.15■□□□□ 0.18
COMMD4-208ENST00000563220 MFAP5Q13361 173 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 TPBGQ13641 420 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 ZNF239Q16600 458 aaKnown RBP16.15■□□□□ 0.18
COMMD4-208ENST00000563220 SLC25A25Q6KCM7 469 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 TMPRSS11AQ6ZMR5 421 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 ZFP41Q8N8Y5 198 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 OR2T27Q8NH04 317 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 CHCHD6Q9BRQ6 235 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 NPIPA1Q9UND3 350 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 COPS3Q9UNS2 423 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 B3GNT3Q9Y2A9 372 aa16.15■□□□□ 0.18
COMMD4-208ENST00000563220 LOC100506127A0A0U1RQW1 187 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 AQP7P3A6NL99 342 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 EFSO43281 561 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 PFDN1O60925 122 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 GPX5O75715 221 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 DAP3P51398 398 aaKnown RBP16.14■□□□□ 0.17
COMMD4-208ENST00000563220 ACTC1P68032 377 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 ACTA1P68133 377 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 H3F3AP84243 136 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 ACSM1Q08AH1 577 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 CDC20Q12834 499 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 ETFDHQ16134 617 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 GALNTL5Q7Z4T8 443 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 ZBTB46Q86UZ6 589 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 KLBQ86Z14 1044 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 HAS2Q92819 552 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 KLHL15Q96M94 604 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 CENPOQ9BU64 300 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 EMC6Q9BV81 110 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 FAIMQ9NVQ4 179 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 NDUFB11Q9NX14 153 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 BABAM2Q9NXR7 383 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 POLHQ9Y253 713 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 NOX1Q9Y5S8 564 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 FKBP7Q9Y680 259 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 TVP23AA6NH52 213 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 CDK2AP1O14519 115 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 TNFSF11O14788 317 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 MAGEB4O15481 346 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-208ENST00000563220 SLC16A7O60669 478 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 SPINK2P20155 84 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 CRYBB2P43320 205 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 STARP49675 285 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 CLDN20P56880 219 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 OR12D2P58182 307 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 TMEM225Q6GV28 225 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 TIGD4Q8IY51 512 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 SYT14Q8NB59 555 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 FDCSPQ8NFU4 85 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 SFXN2Q96NB2 322 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 TTTY10Q9BZA0 68 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 ZNF703Q9H7S9 590 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-208ENST00000563220 ZMIZ1Q9ULJ6 1067 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 PCDHGB7Q9Y5F8 929 aa16.14■□□□□ 0.17
COMMD4-208ENST00000563220 A6NIZ1 184 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 ZNF891A8MT65 544 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-208ENST00000563220 NME2P1O60361 137 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 CTLA4P16410 223 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 NME2P22392 152 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 BIDP55957 195 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 GFRA1P56159 465 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 RAP1BP61224 184 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 RAP1AP62834 184 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 FOXC1Q12948 553 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 GPAT4Q86UL3 456 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 UEVLDQ8IX04 471 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 KCNE4Q8WWG9 221 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 UFD1Q92890 307 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 TRMT61AQ96FX7 289 aaKnown RBP16.13■□□□□ 0.17
COMMD4-208ENST00000563220 C4orf36Q96KX1 117 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 OXGR1Q96P68 337 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 KCNK17Q96T54 332 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 TTTY12Q9BZ98 90 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 RNF32Q9H0A6 362 aa16.13■□□□□ 0.17
COMMD4-208ENST00000563220 TSPAN10Q9H1Z9 355 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-208ENST00000563220 CCDC86Q9H6F5 360 aaKnown RBP16.13■□□□□ 0.17
COMMD4-208ENST00000563220 SF3B6Q9Y3B4 125 aaKnown RBP16.13■□□□□ 0.17
COMMD4-208ENST00000563220 SIRT4Q9Y6E7 314 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-208ENST00000563220 IGLV1-36A0A0B4J1U3 117 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 J3QLW9 94 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 DLL1O00548 723 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 TRAF3IP2O43734 574 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-208ENST00000563220 CELA3AP09093 270 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 ZNF19P17023 458 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 ARG2P78540 354 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 DEFB109BQ30KR1 87 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 CRTC2Q53ET0 693 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-208ENST00000563220 SLC16A9Q7RTY1 509 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms