RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CFAP53Q96M91 514 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 HIST1H4GQ99525 98 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 ARHGDIGQ99819 225 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 C20orf85Q9H1P6 137 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 NEUROG2Q9H2A3 272 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 ZNF702PQ9H963 129 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 KCNJ16Q9NPI9 418 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 PXMP2Q9NR77 195 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 AGPAT4Q9NRZ5 378 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 DUX4Q9UBX2 424 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 ASF1AQ9Y294 204 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 ZNF256Q9Y2P7 627 aaPredicted RBP2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 CDHR2Q9BYE9 1310 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 INSRP06213 1382 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 MSH6P52701 1360 aa2.33□□□□□ -2.04
SHCBP1-202ENST00000563219 A0A1B0GTQ1 180 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 CCDC182A6NF36 153 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 TMEM110-MUSTN1A8MSY1 372 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 AIREO43918 545 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 SOX15O60248 233 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 SUPT7LO94864 414 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 IGHV2-5P01817 119 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 SERPINA5P05154 406 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 C2P06681 752 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 MGMTP16455 207 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 TCN1P20061 433 aaPredicted RBP2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 CNR1P21554 472 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 CD1BP29016 333 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 HMOX2P30519 316 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 GLP1RP43220 463 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 BTDP43251 543 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 TAS2R19P59542 299 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 GPX6P59796 221 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 EIF3EP60228 445 aaKnown RBP2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 UBE2MP61081 183 aaKnown RBP2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 ZNF763Q0D2J5 394 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 DNAJC3Q13217 504 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 NSDHLQ15738 373 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 ZSCAN26Q16670 478 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 KCTD19Q17RG1 926 aaPredicted RBP2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 FHL5Q5TD97 284 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 METTL11BQ5VVY1 283 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 C22orf42Q6IC83 251 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 SLC25A48Q6ZT89 311 aaKnown RBP2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 RFLNAQ6ZTI6 216 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 LIX1Q8N485 282 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 PNKDQ8N490 385 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 ZFP41Q8N8Y5 198 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 BBS1Q8NFJ9 593 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 OR10G3Q8NGC4 313 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 GPR151Q8TDV0 419 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 CA5BP1Q8WTZ4 195 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 SDR42E1Q8WUS8 393 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 NDRG1Q92597 394 aaKnown RBP2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 IL22RA2Q969J5 263 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 SGK3Q96BR1 496 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 ZNF707Q96C28 371 aaPredicted RBP2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 C16orf74Q96GX8 76 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 SMIM14Q96QK8 99 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 PAIP2Q9BPZ3 127 aaKnown RBP2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 SELENOIQ9C0D9 397 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 SLC7A5P2Q9GIP4 190 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 MFFQ9GZY8 342 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 EHD1Q9H4M9 534 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 CWH43Q9H720 699 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 CYP3A43Q9HB55 503 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 PLGRKTQ9HBL7 147 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 MRPL47Q9HD33 250 aaKnown RBP2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 CHRAC1Q9NRG0 131 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 C20orf96Q9NUD7 363 aaPredicted RBP2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 CALYQ9NYX4 217 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 MTRF1LQ9UGC7 380 aaKnown RBP2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 SLC25A15Q9Y619 301 aa2.32□□□□□ -2.04
SHCBP1-202ENST00000563219 NOTCH2Q04721 2471 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 TRAV25A0A0B4J276 109 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 IGKV1D-13A0A0B4J2D9 117 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 TRBV11-1A0A0K0K1C0 115 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 ZNF816-ZNF321PA0A0X1KG74 233 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 ERICH4A6NGS2 130 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 CDC7O00311 574 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 DYNC1I1O14576 645 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 CASC3O15234 703 aaKnown RBP2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 MGRN1O60291 552 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 SNAPINO95295 136 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 LY6G6DO95868 133 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 IGKV1-13P0DP09 117 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 MYL2P10916 166 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 FOLR1P15328 257 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 ZNF250P15622 560 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 TBPP20226 339 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 CASQ1P31415 396 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 VHLP40337 213 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 NAMPTP43490 491 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 KIR2DS4P43632 304 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 YAP1P46937 504 aaKnown RBP2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 SUB1P53999 127 aaKnown RBP eCLIP2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 RIPPLY3P57055 190 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 KRTAP10-8P60410 259 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 RAB10P61026 200 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 ERVK-25P63136 954 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms