RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 ING1Q9UK53 422 aaPredicted RBP11.78□□□□□ -0.52
SPG7-207ENST00000563218 LOC100130705A0A1B0GUX0 176 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 A0A1W2PNR3 127 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 CD5LO43866 347 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 LYZL6O75951 148 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 RPSAP08865 295 aaKnown RBP11.77□□□□□ -0.53
SPG7-207ENST00000563218 GSTM3P21266 225 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 ENPP1P22413 925 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 IL32P24001 234 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 IDUAP35475 653 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 RBM34P42696 430 aaKnown RBP11.77□□□□□ -0.53
SPG7-207ENST00000563218 SUMO3P55854 103 aaPredicted RBP11.77□□□□□ -0.53
SPG7-207ENST00000563218 COX10Q12887 443 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 NPRL3Q12980 569 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 PDK3Q15120 406 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 TMEM201Q5SNT2 666 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 KRT80Q6KB66 452 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 C1orf94Q6P1W5 598 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 FCRLAQ7L513 359 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 BHLHA15Q7RTS1 189 aaPredicted RBP11.77□□□□□ -0.53
SPG7-207ENST00000563218 PARP8Q8N3A8 854 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 TMEM239Q8WW34 195 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 ZNF775Q96BV0 537 aaPredicted RBP11.77□□□□□ -0.53
SPG7-207ENST00000563218 TRMT61AQ96FX7 289 aaKnown RBP11.77□□□□□ -0.53
SPG7-207ENST00000563218 GABARAPL3Q9BY60 117 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 MED31Q9Y3C7 131 aa11.77□□□□□ -0.53
SPG7-207ENST00000563218 IGHV4-30-2A0A087WSY4 118 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 A0A096LNT2 108 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 SHISA9B4DS77 424 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 SLC16A6O15403 523 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 PNMTP11086 282 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 OSMP13725 252 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 MYF6P23409 242 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 ADH6P28332 368 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 IL18R1Q13478 541 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 STK11Q15831 433 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 TMEM176BQ3YBM2 270 aaPredicted RBP11.76□□□□□ -0.53
SPG7-207ENST00000563218 PDSS1Q5T2R2 415 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 TTC33Q6PID6 262 aaPredicted RBP11.76□□□□□ -0.53
SPG7-207ENST00000563218 KLHL17Q6TDP4 642 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 WDR88Q6ZMY6 472 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 ZER1Q7Z7L7 766 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 NRMQ8IXM6 262 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 CDK20Q8IZL9 346 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 HTRA1Q92743 480 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 KISS1RQ969F8 398 aaPredicted RBP11.76□□□□□ -0.53
SPG7-207ENST00000563218 CPNE4Q96A23 557 aaPredicted RBP11.76□□□□□ -0.53
SPG7-207ENST00000563218 C3orf49Q96BT1 292 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 NR1H4Q96RI1 486 aaPredicted RBP11.76□□□□□ -0.53
SPG7-207ENST00000563218 GRIP2Q9C0E4 1043 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 ESRP2Q9H6T0 727 aaKnown RBP11.76□□□□□ -0.53
SPG7-207ENST00000563218 FANCFQ9NPI8 374 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 ICAM5Q9UMF0 924 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 TMEM5Q9Y2B1 443 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 GMPPBQ9Y5P6 360 aa11.76□□□□□ -0.53
SPG7-207ENST00000563218 ELOA3DA6NLF2 546 aaPredicted RBP11.75□□□□□ -0.53
SPG7-207ENST00000563218 PIP5K1CO60331 668 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 TP53P04637 393 aaPredicted RBP11.75□□□□□ -0.53
SPG7-207ENST00000563218 GNAO1P09471 354 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 IFI30P13284 250 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 ELK4P28324 431 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 POLR2IP36954 125 aaKnown RBP11.75□□□□□ -0.53
SPG7-207ENST00000563218 SLC1A3P43003 542 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 OMPP47874 163 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 RPS6KA3P51812 740 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 CDH11P55287 796 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 ESRRGP62508 458 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 LSM11P83369 360 aaKnown RBP eCLIP11.75□□□□□ -0.533e-7■■□□□ 12.9
SPG7-207ENST00000563218 SPOCK1Q08629 439 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 TSPAN31Q12999 210 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 RNPS1Q15287 305 aaKnown RBP11.75□□□□□ -0.53
SPG7-207ENST00000563218 ETFDHQ16134 617 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 ELOA3BQ3SY89 546 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 CD300LDQ6UXZ3 194 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 USP51Q70EK9 711 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 C8orf59Q8N0T1 100 aaPredicted RBP11.75□□□□□ -0.53
SPG7-207ENST00000563218 SETD9Q8NE22 299 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 ELOA3Q8NG57 546 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 TMEM234Q8WY98 164 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 HSD17B8Q92506 261 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 FAM46AQ96IP4 442 aaKnown RBP11.75□□□□□ -0.53
SPG7-207ENST00000563218 APOL4Q9BPW4 351 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 POTEKPQ9BYX7 375 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 C12orf10Q9HB07 376 aa11.75□□□□□ -0.53
SPG7-207ENST00000563218 A0A087WUJ7 227 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 H3BN98 237 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 KPNA4O00629 521 aaPredicted RBP11.74□□□□□ -0.53
SPG7-207ENST00000563218 SMAD9O15198 467 aaKnown RBP11.74□□□□□ -0.53
SPG7-207ENST00000563218 SSX4O60224 188 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 CLIC3O95833 236 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 YES1P07947 543 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 PRKCAP17252 672 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 IGHV1-2P23083 117 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 FPR3P25089 353 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 POU1F1P28069 291 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 GPR4P46093 362 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 OR3A2P47893 321 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 GSSP48637 474 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 CRISP1P54107 249 aa11.74□□□□□ -0.53
SPG7-207ENST00000563218 PRKCDQ05655 676 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms