RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 HPRP00739 348 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 IGHV3-9P01782 118 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 SOD3P08294 240 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 FPR3P25089 353 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 FASP25445 335 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 ARHGDIAP52565 204 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 KPNB1Q14974 876 aaKnown RBP13.76□□□□□ -0.21
USB1-208ENST00000563207 P2RY6Q15077 328 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 ZBED5Q49AG3 693 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 NCMAPQ5T1S8 102 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 Q6ZT83 130 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 HDDC2Q7Z4H3 204 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 ZER1Q7Z7L7 766 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 KDM8Q8N371 416 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 POMGNT2Q8NAT1 580 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 MAPK1IP1LQ8NDC0 245 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 STEAP2Q8NFT2 490 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 KBTBD8Q8NFY9 601 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 GNPDA2Q8TDQ7 276 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 NRBF2Q96F24 287 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 FAM46AQ96IP4 442 aaKnown RBP13.76□□□□□ -0.21
USB1-208ENST00000563207 ZNF385AQ96PM9 386 aaKnown RBP13.76□□□□□ -0.21
USB1-208ENST00000563207 BDH2Q9BUT1 245 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 STX18Q9P2W9 335 aaKnown RBP13.76□□□□□ -0.21
USB1-208ENST00000563207 A0A1W2PRG6 482 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 C11orf98E9PRG8 122 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 CDC42EP2O14613 210 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 ZNF432O94892 652 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 IL32P24001 234 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 PCSK6P29122 969 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 GPR4P46093 362 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 ERFP50548 548 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 FOXG1P55316 489 aaPredicted RBP13.75□□□□□ -0.21
USB1-208ENST00000563207 POU3F1Q03052 451 aaPredicted RBP13.75□□□□□ -0.21
USB1-208ENST00000563207 RPL18Q07020 188 aaKnown RBP13.75□□□□□ -0.21
USB1-208ENST00000563207 TSPAN31Q12999 210 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 ALG10Q5BKT4 473 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 FBXW9Q5XUX1 488 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 PRSS57Q6UWY2 283 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 CASP12Q6UXS9 341 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 NHLRC1Q6VVB1 395 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 ABHD12BQ7Z5M8 362 aaPredicted RBP13.75□□□□□ -0.21
USB1-208ENST00000563207 ZNF611Q8N823 705 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 TMEM171Q8WVE6 324 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 LRR1Q96L50 414 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 USB1Q9BQ65 265 aaKnown RBP13.75□□□□□ -0.21
USB1-208ENST00000563207 HDHD5Q9BXW7 423 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 LINC00470Q9BZP3 86 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 OR10A4Q9H209 315 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 DENND2DQ9H6A0 471 aaPredicted RBP13.75□□□□□ -0.21
USB1-208ENST00000563207 INIPQ9NRY2 104 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 ZNF701Q9NV72 531 aaPredicted RBP13.75□□□□□ -0.21
USB1-208ENST00000563207 MGAT4BQ9UQ53 548 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 U3KQV3 271 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 DNHD1Q96M86 4753 aa13.75□□□□□ -0.21
USB1-208ENST00000563207 ANK3Q12955 4377 aaKnown RBP13.74□□□□□ -0.21
USB1-208ENST00000563207 UNC119BA6NIH7 251 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 ZNF726A6NNF4 738 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 CENPBD1B2RD01 187 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 NDUFS7O75251 213 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 PTP4A3O75365 173 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 SLC43A1O75387 559 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 E2F6O75461 281 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 TIPRLO75663 272 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 HLA-DOBP13765 273 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 IGHV1-2P23083 117 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 CDKN1AP38936 164 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 AQP2P41181 271 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 GSSP48637 474 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 DAP3P51398 398 aaKnown RBP13.74□□□□□ -0.21
USB1-208ENST00000563207 CLDN17P56750 224 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 BSPH1Q075Z2 132 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 COX10Q12887 443 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 ITGADQ13349 1161 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 LAPTM4AQ15012 233 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 ATP6AP1Q15904 470 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 ZNF770Q6IQ21 691 aaPredicted RBP13.74□□□□□ -0.21
USB1-208ENST00000563207 RPL13AP3Q6NVV1 102 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 PGBD2Q6P3X8 592 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 SLC35D2Q76EJ3 337 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 BHLHA15Q7RTS1 189 aaPredicted RBP13.74□□□□□ -0.21
USB1-208ENST00000563207 PRIMA1Q86XR5 153 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 OR51A7Q8NH64 312 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 OR6X1Q8NH79 312 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 GIPC3Q8TF64 312 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 KISS1RQ969F8 398 aaPredicted RBP13.74□□□□□ -0.21
USB1-208ENST00000563207 TNFRSF13CQ96RJ3 184 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 DGCR6LQ9BY27 220 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 SLCO5A1Q9H2Y9 848 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 VNN3Q9NY84 501 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 NPAP1Q9NZP6 1156 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 UPB1Q9UBR1 384 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 MALT1Q9UDY8 824 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 SIGLEC7Q9Y286 467 aa13.74□□□□□ -0.21
USB1-208ENST00000563207 TRAV27A0A087WT01 109 aa13.73□□□□□ -0.21
USB1-208ENST00000563207 A0A1W2PR80 420 aa13.73□□□□□ -0.21
USB1-208ENST00000563207 NDUFB2O95178 105 aa13.73□□□□□ -0.21
USB1-208ENST00000563207 BCL10O95999 233 aa13.73□□□□□ -0.21
USB1-208ENST00000563207 IGHMP01871 453 aa13.73□□□□□ -0.21
USB1-208ENST00000563207 DANCRP0C864 163 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms