RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 MAT1AQ00266 395 aaKnown RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 RPL18Q07020 188 aaKnown RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 ERV3-1Q14264 604 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 CD226Q15762 336 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 ZNF761Q86XN6 746 aaPredicted RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 SFTPA2Q8IWL1 248 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 C7orf57Q8NEG2 295 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 OR6N2Q8NGY6 317 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 ASB17Q8WXJ9 295 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 MCHR2Q969V1 340 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 SFXN2Q96NB2 322 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 SLC46A1Q96NT5 459 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 TSPAN32Q96QS1 320 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 CHIAQ9BZP6 476 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 C8orf33Q9H7E9 229 aaPredicted RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 GPR27Q9NS67 375 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 CDV3Q9UKY7 258 aaKnown RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 ZNF346Q9UL40 294 aaKnown RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 PPIEQ9UNP9 301 aaKnown RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 PLCL2Q9UPR0 1127 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 ARHGEF17Q96PE2 2063 aaPredicted RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 CACNA1IQ9P0X4 2223 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 TCRBV21S2A2A0A5A6 115 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 CELA2BP08218 269 aaPredicted RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 GABRG2P18507 467 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 CXCL2P19875 107 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 ANXA7P20073 488 aaKnown RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 MAOAP21397 527 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 RPS15P62841 145 aaKnown RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 HYAL1Q12794 435 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 MFSD13AQ14CX5 517 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 MPPED2Q15777 294 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 PCGF3Q3KNV8 242 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 B3GNTL1Q67FW5 361 aaPredicted RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 KIAA0895LQ68EN5 471 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 GPAT4Q86UL3 456 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 ZNF563Q8TA94 476 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 RBPMSQ93062 196 aaKnown RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 TMEM106AQ96A25 262 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 PNPLA2Q96AD5 504 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 MMABQ96EY8 250 aaPredicted RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 ELMOD3Q96FG2 381 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 C4orf45Q96LM5 186 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 GPR174Q9BXC1 333 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 PBX4Q9BYU1 374 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 S1PR5Q9H228 398 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 UCK1Q9HA47 277 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 CA10Q9NS85 328 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 WSB2Q9NYS7 404 aaPredicted RBP11.87□□□□□ -0.51
USB1-207ENST00000563149 GMEB2Q9UKD1 530 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 SPEF1Q9Y4P9 236 aa11.87□□□□□ -0.51
USB1-207ENST00000563149 TRAV8-7A0A075B6U6 113 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 GGT3PA6NGU5 568 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 FRG2CA6NGY1 282 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 TVP23AA6NH52 213 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 SULT1C2O00338 296 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 DCTN6O00399 190 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 OIP5O43482 229 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 CDC40O60508 579 aaKnown RBP eCLIP11.86□□□□□ -0.51
USB1-207ENST00000563149 CTAG2O75638 210 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 AKR7A3O95154 331 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 UTS2O95399 124 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 MAS1P04201 325 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 F13BP05160 661 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 IGHV4-34P06331 123 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 AKAIN1P0CW23 69 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 CALCRP30988 508 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 CSF2RBP32927 897 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 CCR4P51679 360 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 TFF2Q03403 129 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 DMWDQ09019 674 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 SRSF5Q13243 272 aaKnown RBP11.86□□□□□ -0.51
USB1-207ENST00000563149 FZD2Q14332 565 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.86□□□□□ -0.51
USB1-207ENST00000563149 DPY19L4Q7Z388 723 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 KRT77Q7Z794 578 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 NAXDQ8IW45 347 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 GATSQ8NAP1 163 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 OR6N1Q8NGY5 312 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 OTOSQ8NHW6 89 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 FAM174AQ8TBP5 190 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 OMA1Q96E52 524 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 ALX4Q9H161 411 aaPredicted RBP11.86□□□□□ -0.51
USB1-207ENST00000563149 MMACHCQ9Y4U1 282 aa11.86□□□□□ -0.51
USB1-207ENST00000563149 TMEM131Q92545 1883 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 hCG_1807616A0A1W2PRN6 198 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 C4orf47A7E2U8 309 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 C17orf105B2RV13 164 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 PYCARD-AS1I3L0S3 204 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 B3GALNT1O75752 331 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 MELTFP08582 738 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 THEGLP0DJG4 465 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 ZNF250P15622 560 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 TACR3P29371 465 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 S100A11P31949 105 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 RORAP35398 523 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 GABRA4P48169 554 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 SLC37A1P57057 533 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 SEC61A1P61619 476 aaKnown RBP11.85□□□□□ -0.51
USB1-207ENST00000563149 TMEM31Q5JXX7 168 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms