RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 HOXB1P14653 301 aaPredicted RBP11.78□□□□□ -0.52
CDH1-204ENST00000562118 DNAJA1P31689 397 aaKnown RBP11.78□□□□□ -0.52
CDH1-204ENST00000562118 SNTB1Q13884 538 aaKnown RBP11.78□□□□□ -0.52
CDH1-204ENST00000562118 TAB1Q15750 504 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 ATP6AP1Q15904 470 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 NRN1LQ496H8 165 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 LRFN4Q6PJG9 635 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 SMARCD3Q6STE5 483 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 WDR31Q8NA23 367 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 NOXO1Q8NFA2 376 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 OR1K1Q8NGR3 316 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 OR51A7Q8NH64 312 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 GNPDA2Q8TDQ7 276 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 ZNF566Q969W8 418 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 ZNF837Q96EG3 531 aaPredicted RBP11.78□□□□□ -0.52
CDH1-204ENST00000562118 ALG12Q9BV10 488 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 SMURF2Q9HAU4 748 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 OBP2BQ9NPH6 170 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 UPB1Q9UBR1 384 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 MGAT4BQ9UQ53 548 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 SLC25A15Q9Y619 301 aa11.78□□□□□ -0.52
CDH1-204ENST00000562118 ZNF99A8MXY4 864 aaPredicted RBP11.77□□□□□ -0.53
CDH1-204ENST00000562118 H3BNX3 289 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 IMPA2O14732 288 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 DEAF1O75398 565 aaPredicted RBP11.77□□□□□ -0.53
CDH1-204ENST00000562118 CTAG2O75638 210 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 CIB2O75838 187 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 GASTP01350 101 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 IGHG1P01857 330 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 HRGP04196 525 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 ACADSP16219 412 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 PAX7P23759 505 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 IL32P24001 234 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 SSTR2P30874 369 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 IST1P53990 364 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 CTXN1P60606 82 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 ROR2Q01974 943 aaKnown RBP11.77□□□□□ -0.53
CDH1-204ENST00000562118 TGFBR3Q03167 851 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 CAMK2DQ13557 499 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 MELKQ14680 651 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 TSC22D1Q15714 1073 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 RFX4Q33E94 735 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 SHQ1Q6PI26 577 aaKnown RBP11.77□□□□□ -0.53
CDH1-204ENST00000562118 DPY19L2P2Q6ZN68 376 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 RASSF6Q6ZTQ3 369 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 FOXL2NBQ6ZUU3 175 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 UBE2J2Q8N2K1 259 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 ARIH2OSQ8N7S6 290 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 HDAC2Q92769 488 aaKnown RBP11.77□□□□□ -0.53
CDH1-204ENST00000562118 BCL2L2Q92843 193 aaPredicted RBP11.77□□□□□ -0.53
CDH1-204ENST00000562118 TMEM204Q9BSN7 226 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 KATNB1Q9BVA0 655 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 OR52D1Q9H346 318 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 DENND2DQ9H6A0 471 aaPredicted RBP11.77□□□□□ -0.53
CDH1-204ENST00000562118 CRLF2Q9HC73 371 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 SLC17A5Q9NRA2 495 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 GLTPQ9NZD2 209 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 CRNNQ9UBG3 495 aaPredicted RBP11.77□□□□□ -0.53
CDH1-204ENST00000562118 ZNF346Q9UL40 294 aaKnown RBP11.77□□□□□ -0.53
CDH1-204ENST00000562118 AP4S1Q9Y587 144 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 CDH10Q9Y6N8 788 aa11.77□□□□□ -0.53
CDH1-204ENST00000562118 A6NIZ1 184 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 ZNF726A6NNF4 738 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 BHLHE40O14503 412 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 RAD51DO75771 328 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 FCGR1AP12314 374 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 SDHAP31040 664 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 CSNK1A1P48729 337 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 RAP1BP61224 184 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 RAP1AP62834 184 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 IL1RL1Q01638 556 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 COX10Q12887 443 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 FOXD4Q12950 439 aaPredicted RBP11.76□□□□□ -0.53
CDH1-204ENST00000562118 PPP1R8Q12972 351 aaKnown RBP11.76□□□□□ -0.53
CDH1-204ENST00000562118 KPNB1Q14974 876 aaKnown RBP11.76□□□□□ -0.53
CDH1-204ENST00000562118 CEACAM16Q2WEN9 425 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 C3orf36Q3SXR2 165 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 MESTQ5EB52 335 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 GPR139Q6DWJ6 353 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 RPL13AP3Q6NVV1 102 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 FAHD1Q6P587 224 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 ANKRD16Q6P6B7 361 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 SLC25A47Q6Q0C1 308 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 GPR137CQ8N3F9 429 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 FAM169BQ8N8A8 192 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 AQP11Q8NBQ7 271 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 OR10G2Q8NGC3 310 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 FANK1Q8TC84 345 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 FNDC8Q8TC99 324 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 SNX18Q96RF0 628 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 MED18Q9BUE0 208 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 GABARAPL1Q9H0R8 117 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 RASSF1Q9NS23 344 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 ZNF226Q9NYT6 803 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 ZNF224Q9NZL3 707 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 VSX1Q9NZR4 365 aaPredicted RBP11.76□□□□□ -0.53
CDH1-204ENST00000562118 REV1Q9UBZ9 1251 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 ADAM18Q9Y3Q7 739 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 U3KQV3 271 aa11.76□□□□□ -0.53
CDH1-204ENST00000562118 TIPRLO75663 272 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms