RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ACOX3O15254 700 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 AHCYL1O43865 530 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 OR10H2O60403 315 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 NOL3O60936 208 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 RGS11O94810 467 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 SERPINA1P01009 418 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 CST1P01037 141 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 ALPLP05186 524 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 TFAP2AP05549 437 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 KLK1P06870 262 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 FGF2P09038 288 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 SPARCP09486 303 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 LINGO3P0C6S8 592 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 THRBP10828 461 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 ERGP11308 486 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 GABRA1P14867 456 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 ZNF23P17027 643 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 TNFRSF1BP20333 461 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 UQCRC2P22695 453 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 LOXP28300 417 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 PTPN6P29350 595 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 PDHA2P29803 388 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 PBLDP30039 288 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 CMPK1P30085 196 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 IFNA8P32881 189 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 SHMT2P34897 504 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 RYKP34925 604 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 PCGF2P35227 344 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 AHRP35869 848 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 CHI3L1P36222 383 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 MAGEA2P43356 314 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 GZMMP51124 257 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 MAPK12P53778 367 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 TPD52P55327 224 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 OR4D2P58180 307 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 MTPNP58546 118 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 SELENOVP59797 346 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 CXCR4P61073 352 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 STXBP1P61764 594 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 TBPL1P62380 186 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 SELENOWP63302 87 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 PRDX1Q06830 199 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 FAM27E3Q08E93 113 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 C2orf80Q0P641 193 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 DDX39BQ13838 428 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 PDE7AQ13946 482 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 NFE2L1Q14494 772 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 RGNQ15493 299 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 FAM189A2Q15884 450 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 NRF1Q16656 503 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 PRICKLE4Q2TBC4 344 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 SLC36A3Q495N2 470 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 PRAMEF8Q5VWM4 474 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 KHDRBS2Q5VWX1 349 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 PRAMEF7Q5VXH5 474 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 FAM71E1Q6IPT2 247 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 NIPAL1Q6NVV3 410 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 SHQ1Q6PI26 577 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 SUSD1Q6UWL2 747 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 ZNF704Q6ZNC4 412 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 LINC00299Q6ZSB3 139 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 CCDC80Q76M96 950 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 TRILQ7L0X0 811 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 ZNF367Q7RTV3 350 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 ZNF550Q7Z398 422 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 COMMD6Q7Z4G1 85 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 TMPRSS11BQ86T26 416 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 CYP4Z1Q86W10 505 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 RPS19BP1Q86WX3 136 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 NUDT13Q86X67 352 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 CROCCP3Q8IVE0 287 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 C8orf59Q8N0T1 100 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 ZNF786Q8N393 782 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 DNAJC22Q8N4W6 341 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 LINC00471Q8N535 108 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 KRTCAP2Q8N6L1 136 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 C1orf52Q8N6N3 182 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 ZNF611Q8N823 705 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 ZFP62Q8NB50 900 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 GJC3Q8NFK1 279 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 OR4A15Q8NGL6 344 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 OR2L8Q8NGY9 312 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 ZNF420Q8TAQ5 688 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 MAGEE2Q8TD90 523 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 ZNF418Q8TF45 676 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 C16orf78Q8WTQ4 265 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 NEIL2Q969S2 332 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 MOAP1Q96BY2 351 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 SLC47A1Q96FL8 570 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 TSSK3Q96PN8 268 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 OR4K3Q96R72 315 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 HBEGFQ99075 208 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 MTERF1Q99551 399 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 SEPHS2Q99611 448 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 EPYCQ99645 322 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 CIB1Q99828 191 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 BCL7BQ9BQE9 202 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 TBCDQ9BTW9 1192 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 DOHHQ9BU89 302 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 MED18Q9BUE0 208 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms