RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ICA1LQ8NDH6 482 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 OR4F6Q8NGB9 312 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 ZNF563Q8TA94 476 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 SYNPRQ8TBG9 265 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 RAB40AQ8WXH6 277 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 LRTOMTQ8WZ04 291 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 HOXB13Q92826 284 aaPredicted RBP4.41□□□□□ -1.7
HERC1-213ENST00000561359 CDS1Q92903 461 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 MS4A4EQ96PG1 132 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 GPR22Q99680 433 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 CCDC106Q9BWC9 280 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 SF3B5Q9BWJ5 86 aaKnown RBP4.41□□□□□ -1.7
HERC1-213ENST00000561359 EGLN1Q9GZT9 426 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 IQCGQ9H095 443 aaKnown RBP4.41□□□□□ -1.7
HERC1-213ENST00000561359 DPAGT1Q9H3H5 408 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 SERHL2Q9H4I8 314 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 PIF1Q9H611 641 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 SLC7A8Q9UHI5 535 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 GRID1Q9ULK0 1009 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 SIGLEC9Q9Y336 463 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 RRP15Q9Y3B9 282 aaKnown RBP4.41□□□□□ -1.7
HERC1-213ENST00000561359 DTNAQ9Y4J8 743 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 IGHV2-70DA0A0C4DH43 119 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 ZNF561-AS1K7EIQ3 104 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 TNFRSF13BO14836 293 aaPredicted RBP4.4□□□□□ -1.71
HERC1-213ENST00000561359 MGRN1O60291 552 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 AKR7A3O95154 331 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 RAB36O95755 333 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 LCKP06239 509 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 CHN1P15882 459 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 RYKP34925 604 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 IER3P46695 156 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 PTDSS1P48651 473 aaKnown RBP4.4□□□□□ -1.71
HERC1-213ENST00000561359 ZNF81P51508 661 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 GYS2P54840 703 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 FGF12P61328 243 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 BTKQ06187 659 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 ZNF763Q0D2J5 394 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 HNRNPA0Q13151 305 aaKnown RBP4.4□□□□□ -1.71
HERC1-213ENST00000561359 SKP2Q13309 424 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 FRG1Q14331 258 aaKnown RBP4.4□□□□□ -1.71
HERC1-213ENST00000561359 CEACAM16Q2WEN9 425 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 GGTA1PQ4G0N0 100 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 TMEM155Q4W5P6 130 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 SPIN4Q56A73 249 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 PDZK1Q5T2W1 519 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 FAM219BQ5XKK7 198 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 CLEC6AQ6EIG7 209 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 ZFAND6Q6FIF0 208 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 TMEM225Q6GV28 225 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 SLC35E4Q6ICL7 350 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 NOXRED1Q6NXP6 359 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 METTL2BQ6P1Q9 378 aaKnown RBP4.4□□□□□ -1.71
HERC1-213ENST00000561359 ADAMTSL5Q6ZMM2 481 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 C1orf122Q6ZSJ8 110 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 CMC1Q7Z7K0 106 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 GPR137CQ8N3F9 429 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 KLHDC1Q8N7A1 406 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 TMEM99Q8N816 258 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 Q8NFD4 153 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 C11orf40Q8WZ69 217 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 DDIT4LQ96D03 193 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 ZG16BQ96DA0 208 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 PHF21BQ96EK2 531 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 GIMAP5Q96F15 307 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 APIPQ96GX9 242 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 PCGF1Q9BSM1 259 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 C1QTNF3Q9BXJ4 246 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 ACTRT3Q9BYD9 372 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 LINC00470Q9BZP3 86 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 TRIM15Q9C019 465 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 OR51B6Q9H340 312 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 GPR35Q9HC97 309 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 ACOXLQ9NUZ1 547 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 ETAA1Q9NY74 926 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 TAS2R7Q9NYW3 318 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 LRCH1Q9Y2L9 728 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 USH1CQ9Y6N9 552 aa4.4□□□□□ -1.71
HERC1-213ENST00000561359 IGLV3-9A0A075B6K5 115 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 TMED7-TICAM2A0A0A6YYA0 188 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 AQP7P3A6NL99 342 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 F5H0A9 414 aaPredicted RBP4.39□□□□□ -1.71
HERC1-213ENST00000561359 SCN2BO60939 215 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 ZFPL1O95159 310 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 OTCP00480 354 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 CSTAP01040 98 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 IGHV1-46P01743 117 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 KRT6AP02538 564 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 KRT6BP04259 564 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 GPIP06744 558 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 IFI6P09912 130 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 VSIG10L2P0DP72 767 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 HSD3B1P14060 373 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 ZNF250P15622 560 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 H2AFXP16104 143 aaPredicted RBP4.39□□□□□ -1.71
HERC1-213ENST00000561359 ZNF14P17017 642 aaPredicted RBP4.39□□□□□ -1.71
HERC1-213ENST00000561359 TSPAN8P19075 237 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 HSD3B2P26439 372 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 HOXD3P31249 432 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms