RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 KLHL14Q9P2G3 628 aa15.77■□□□□ 0.12
TPM1-226ENST00000560959 LGALS13Q9UHV8 139 aa15.77■□□□□ 0.12
TPM1-226ENST00000560959 WNK2Q9Y3S1 2297 aa15.77■□□□□ 0.11
TPM1-226ENST00000560959 PRKDCP78527 4128 aaKnown RBP15.76■□□□□ 0.11
TPM1-226ENST00000560959 TMEM247A6NEH6 219 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 CLDN34H7C241 214 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 RFXANKO14593 260 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 HPRP00739 348 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 MT-ND5P03915 603 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 SERPINE1P05121 402 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 ETFAP13804 333 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 IL12AP29459 219 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 CRATP43155 626 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 DSTNP60981 165 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 ABCE1P61221 599 aaKnown RBP15.76■□□□□ 0.11
TPM1-226ENST00000560959 ALKBH6Q3KRA9 238 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 USP51Q70EK9 711 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 PXKQ7Z7A4 578 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 DPPA2Q7Z7J5 298 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 SKA3Q8IX90 412 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 GLB1L3Q8NCI6 653 aaPredicted RBP15.76■□□□□ 0.11
TPM1-226ENST00000560959 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.76■□□□□ 0.11
TPM1-226ENST00000560959 TMEM19Q96HH6 336 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 BCL2L14Q9BZR8 327 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 BCL2L10Q9HD36 194 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 HAO1Q9UJM8 370 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 NUP50Q9UKX7 468 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 VWFP04275 2813 aa15.76■□□□□ 0.11
TPM1-226ENST00000560959 IGKV1D-42A0A075B6H8 117 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 SNAP29O95721 258 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 PTHP01270 115 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 RNASE1P07998 156 aaKnown RBP15.75■□□□□ 0.11
TPM1-226ENST00000560959 NQO1P15559 274 aaKnown RBP15.75■□□□□ 0.11
TPM1-226ENST00000560959 PUDPQ08623 228 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 FAM91A1Q658Y4 838 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 SLC22A24Q8N4F4 322 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 SLC30A7Q8NEW0 376 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 ELMOD3Q96FG2 381 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 TXNDC15Q96J42 360 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 EPYCQ99645 322 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 ASPNQ9BXN1 380 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 MEAF6Q9HAF1 191 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 SAP30LQ9HAJ7 183 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 TCF7L2Q9NQB0 619 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 AIG1Q9NVV5 245 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 MRPL39Q9NYK5 338 aaKnown RBP15.75■□□□□ 0.11
TPM1-226ENST00000560959 PLEK2Q9NYT0 353 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 POLR3KQ9Y2Y1 108 aaPredicted RBP15.75■□□□□ 0.11
TPM1-226ENST00000560959 GPR45Q9Y5Y3 372 aa15.75■□□□□ 0.11
TPM1-226ENST00000560959 A0A1B0GWA3 101 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 DNAJC9-AS1A6NH13 148 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 TYROBPO43914 113 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 FOXH1O75593 365 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 IGHV3-13P01766 116 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 IL6P05231 212 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 ALDOCP09972 364 aaKnown RBP15.74■□□□□ 0.11
TPM1-226ENST00000560959 OR8G3PP0DMU2 310 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 ATP4BP51164 291 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 UCP2P55851 309 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 HOXC5Q00444 222 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 SLC3A1Q07837 685 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 RBBP4Q09028 425 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 RPS26P11Q5JNZ5 115 aaPredicted RBP15.74■□□□□ 0.11
TPM1-226ENST00000560959 ULK3Q6PHR2 472 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 OR1J2Q8NGS2 313 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 FGFBP3Q8TAT2 258 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 SLC25A28Q96A46 364 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 C1orf147Q96MC9 270 aaPredicted RBP15.74■□□□□ 0.11
TPM1-226ENST00000560959 TSPAN32Q96QS1 320 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 ZBTB18Q99592 522 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 GAL3ST1Q99999 423 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 NUF2Q9BZD4 464 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 TPT1P8Q9HAU6 139 aa15.74■□□□□ 0.11
TPM1-226ENST00000560959 BGLAPP02818 100 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 FAM157BP0CG42 384 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 CBLP22681 906 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 CSNK1A1P48729 337 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 LCN2P80188 198 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 BAMBIQ13145 260 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 PMS2P3Q13401 168 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 ALG10BQ5I7T1 473 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 WDFY1Q8IWB7 410 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 ST7LQ8TDW4 575 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 TMEM54Q969K7 222 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 SLC47A1Q96FL8 570 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 ROPN1BQ9BZX4 212 aaPredicted RBP15.73■□□□□ 0.11
TPM1-226ENST00000560959 C20orf27Q9GZN8 174 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 LRMDAQ9H2I8 198 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 ROPN1Q9HAT0 212 aaPredicted RBP15.73■□□□□ 0.11
TPM1-226ENST00000560959 CDH20Q9HBT6 801 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 SLC6A13Q9NSD5 602 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 ARMCX1Q9P291 453 aa15.73■□□□□ 0.11
TPM1-226ENST00000560959 PLPP3O14495 311 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 BIRC5O15392 142 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 TPD52L2O43399 206 aaKnown RBP15.72■□□□□ 0.11
TPM1-226ENST00000560959 MFN2O95140 757 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 FARS2O95363 451 aaKnown RBP15.72■□□□□ 0.11
TPM1-226ENST00000560959 LCKP06239 509 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 PATE4P0C8F1 98 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 ETS2P15036 469 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms