RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 LY6EQ16553 131 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 TRIM40Q6P9F5 258 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 FAM92BQ6ZTR7 304 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 LINC00173Q6ZV60 143 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 PEX26Q7Z412 305 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 OR52M1Q8NGK5 317 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 FAM110BQ8TC76 370 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 FRZBQ92765 325 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 BMFQ96LC9 184 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 RPRD1AQ96P16 312 aaPredicted RBP2.37□□□□□ -2.03
PSMA4-221ENST00000560842 SORT1Q99523 831 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 CTRCQ99895 268 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 ADAP2Q9NPF8 381 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 POLE4Q9NR33 117 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 BLOC1S6Q9UL45 172 aa2.37□□□□□ -2.03
PSMA4-221ENST00000560842 MSH6P52701 1360 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 C15orf38-AP3S2A0A0A6YYH1 394 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 IGHV5-51A0A0C4DH38 117 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 ZNF726A6NNF4 738 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 TOM1O60784 492 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 ENTPD5O75356 428 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 MAGEA8P43361 318 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 NCBP2P52298 156 aaKnown RBP eCLIP2.36□□□□□ -2.03
PSMA4-221ENST00000560842 OGDHQ02218 1023 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 FGL1Q08830 312 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 ABCA11PQ4W5N1 156 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 DUX4L9Q6RFH8 374 aaPredicted RBP2.36□□□□□ -2.03
PSMA4-221ENST00000560842 SLC25A48Q6ZT89 311 aaKnown RBP2.36□□□□□ -2.03
PSMA4-221ENST00000560842 TMEM135Q86UB9 458 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 ZNF679Q8IYX0 411 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.36□□□□□ -2.03
PSMA4-221ENST00000560842 PSKH2Q96QS6 385 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 OR8B4Q96RC9 309 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 CNN2Q99439 309 aaKnown RBP2.36□□□□□ -2.03
PSMA4-221ENST00000560842 SH3GL3Q99963 347 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 KCTD14Q9BQ13 255 aaPredicted RBP2.36□□□□□ -2.03
PSMA4-221ENST00000560842 GABARAPL3Q9BY60 117 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 PPA2Q9H2U2 334 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 ANKRD19PQ9H560 264 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 AZI2Q9H6S1 392 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 NMRAL1Q9HBL8 299 aa2.36□□□□□ -2.03
PSMA4-221ENST00000560842 TRAV39A0A0B4J263 110 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 GMFGO60234 142 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 TSPAN12O95859 305 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 C6orf47O95873 294 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 GAPDHP04406 335 aaKnown RBP2.35□□□□□ -2.03
PSMA4-221ENST00000560842 CD5P06127 495 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 PTMAP06454 111 aaKnown RBP2.35□□□□□ -2.03
PSMA4-221ENST00000560842 RHOXF2BP0C7M4 288 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 MUC1P15941 1255 aaPredicted RBP2.35□□□□□ -2.03
PSMA4-221ENST00000560842 PGAM1P18669 254 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 HSD17B2P37059 387 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 UGT2B15P54855 530 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 ACTA2P62736 377 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 ACTC1P68032 377 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 SLC7A9P82251 487 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 ARHGAP19Q14CB8 494 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 ZBED5Q49AG3 693 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 CNIH2Q6PI25 160 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 EFL1Q7Z2Z2 1120 aaKnown RBP2.35□□□□□ -2.03
PSMA4-221ENST00000560842 UBALD2Q8IYN6 164 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 PGAM4Q8N0Y7 254 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 ZNF721Q8TF20 911 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 SGK3Q96BR1 496 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 ZNF578Q96N58 590 aaPredicted RBP2.35□□□□□ -2.03
PSMA4-221ENST00000560842 SH3GL1Q99961 368 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 NDFIP1Q9BT67 221 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 OSBPL10Q9BXB5 764 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 GORASP2Q9H8Y8 452 aa2.35□□□□□ -2.03
PSMA4-221ENST00000560842 ZNF629Q9UEG4 869 aaPredicted RBP2.35□□□□□ -2.03
PSMA4-221ENST00000560842 TET2Q6N021 2002 aaPredicted RBP2.35□□□□□ -2.03
PSMA4-221ENST00000560842 CENPJQ9HC77 1338 aaPredicted RBP2.35□□□□□ -2.03
PSMA4-221ENST00000560842 A0A1W2PPV9 198 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 ZNF705GA8MUZ8 300 aaPredicted RBP2.34□□□□□ -2.03
PSMA4-221ENST00000560842 SERPINE3A8MV23 424 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 INS-IGF2F8WCM5 200 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 TIMM8AO60220 97 aaPredicted RBP2.34□□□□□ -2.03
PSMA4-221ENST00000560842 C1orf105O95561 183 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 ZNF286BP0CG31 522 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 PSMC3P17980 439 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 GLRA2P23416 452 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 FBXW4P57775 412 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 GPM6BQ13491 265 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 VAX1Q5SQQ9 334 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 STRADAQ7RTN6 431 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 ZNF615Q8N8J6 731 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 SDR42E1Q8WUS8 393 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 GEMIN6Q8WXD5 167 aaKnown RBP2.34□□□□□ -2.03
PSMA4-221ENST00000560842 TRIM62Q9BVG3 475 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 WIF1Q9Y5W5 379 aa2.34□□□□□ -2.03
PSMA4-221ENST00000560842 COLCA2A8K830 154 aa2.33□□□□□ -2.04
PSMA4-221ENST00000560842 H0YCG3 227 aa2.33□□□□□ -2.04
PSMA4-221ENST00000560842 CCL21O00585 134 aa2.33□□□□□ -2.04
PSMA4-221ENST00000560842 B4GALT5O43286 388 aa2.33□□□□□ -2.04
PSMA4-221ENST00000560842 C2P06681 752 aa2.33□□□□□ -2.04
PSMA4-221ENST00000560842 UBTFL1P0CB47 393 aaPredicted RBP2.33□□□□□ -2.04
PSMA4-221ENST00000560842 CEBPDP49716 269 aaPredicted RBP2.33□□□□□ -2.04
PSMA4-221ENST00000560842 UBE2HP62256 183 aa2.33□□□□□ -2.04
PSMA4-221ENST00000560842 MRPL28Q13084 256 aaKnown RBP2.33□□□□□ -2.04
PSMA4-221ENST00000560842 PPIL2Q13356 520 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms