RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 PER3P56645 1201 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 CLDN17P56750 224 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 RPL27P61353 136 aaKnown RBP6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 ESRRGP62508 458 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 ERVK-25P63136 954 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 RUNX1T1Q06455 604 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 SRSF1Q07955 248 aaKnown RBP eCLIP6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 LGALS3BPQ08380 585 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 KRR1Q13601 381 aaKnown RBP6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 CDSNQ15517 529 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 HSPB2Q16082 182 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 LRRC36Q1X8D7 754 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 PGGHGQ32M88 737 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 CLEC12AQ5QGZ9 265 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 TMEM201Q5SNT2 666 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 FBXW10Q5XX13 1052 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 TMEM211Q6ICI0 200 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 NIPAL3Q6P499 406 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 DPY19L2P2Q6ZN68 376 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 SLC35D2Q76EJ3 337 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 CCDC71Q8IV32 467 aaPredicted RBP6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 LIX1LQ8IVB5 337 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 MCEMP1Q8IX19 187 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 IQCF1Q8N6M8 205 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 PACRGLQ8N7B6 248 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 CNEP1R1Q8N9A8 125 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 NOXO1Q8NFA2 376 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 OR52L1Q8NGH7 329 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 TEX47Q8TBZ9 253 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 MAGEE2Q8TD90 523 aaPredicted RBP6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 RND1Q92730 232 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 HDAC2Q92769 488 aaKnown RBP6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 RASD2Q96D21 266 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 STARD4Q96DR4 205 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 TXNDC15Q96J42 360 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 Q96M85 177 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 ZNF570Q96NI8 536 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 EMC6Q9BV81 110 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 TSSK6Q9BXA6 273 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 NDEL1Q9GZM8 345 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 TXNIPQ9H3M7 391 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 ZNF556Q9HAH1 456 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 PRSS50Q9UI38 385 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 ZNF346Q9UL40 294 aaKnown RBP6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 NOSIPQ9Y314 301 aaKnown RBP6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 EMC9Q9Y3B6 208 aa6.22□□□□□ -1.41
CTDSPL2-210ENST00000560834 A0A1W2PRG6 482 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 CLEC18AA5D8T8 446 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 H3BN98 237 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 H7C1C5 153 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 IMPA2O14732 288 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 ARPC3O15145 178 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 AKAP8O43823 692 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 TRMUO75648 421 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 SNAP29O95721 258 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 CD8BP10966 210 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 HIST1H1CP16403 213 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 CHRNB4P30926 498 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 CCKARP32238 428 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 GRK5P34947 590 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 RPL4P36578 427 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 POLR2IP36954 125 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 OR3A2P47893 321 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 RPS6KA3P51812 740 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 CRISP1P54107 249 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 LCN6P62502 163 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 CDK5Q00535 292 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 NPRL3Q12980 569 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 C1DQ13901 141 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 TAF11Q15544 211 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 PHYHD1Q5SRE7 291 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 TSPO2Q5TGU0 170 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 SLX4IPQ5VYV7 408 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 TMEM236Q5W0B7 351 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 FAM205BPQ63HN1 556 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 C12orf73Q69YU5 71 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 GPR139Q6DWJ6 353 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 GTF2IRD2BQ6EKJ0 949 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 CLEC18BQ6UXF7 455 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 ZBTB49Q6ZSB9 765 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 PTCHD4Q6ZW05 846 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 LINGO2Q7L985 606 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 AAED1Q7RTV5 226 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 SYT9Q86SS6 491 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 GTF2IRD2Q86UP8 949 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 LNX2Q8N448 690 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 CLEC18CQ8NCF0 446 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 SDR9C7Q8NEX9 313 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 OR2T33Q8NG76 320 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 OR6X1Q8NH79 312 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 ITLN2Q8WWU7 325 aaPredicted RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 NANOS1Q8WY41 292 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 TMEM54Q969K7 222 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 APH1AQ96BI3 265 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 NMD3Q96D46 503 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 SLC25A44Q96H78 314 aaPredicted RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 ADAD1Q96M93 576 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 RDH12Q96NR8 316 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 ERMAPQ96PL5 475 aaPredicted RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 ALKBH3Q96Q83 286 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms