RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 KLHL13Q9P2N7 655 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 DKKL1Q9UK85 242 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 NPIPA1Q9UND3 350 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 PEX16Q9Y5Y5 336 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 OR2M5A3KFT3 312 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 G3V3Y1 287 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 CDK2AP1O14519 115 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 SC5DO75845 299 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 RGS9O75916 674 aaPredicted RBP11.57□□□□□ -0.56
SNX1-211ENST00000560829 CDRT1O95170 752 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 BMP4P12644 408 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 RBMS1P29558 406 aaKnown RBP11.57□□□□□ -0.56
SNX1-211ENST00000560829 DNASE1L1P49184 302 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 TGM4P49221 684 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 SIRPAP78324 504 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 POU3F1Q03052 451 aaPredicted RBP11.57□□□□□ -0.56
SNX1-211ENST00000560829 RUNX1T1Q06455 604 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 CDK5R1Q15078 307 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 TMEM176BQ3YBM2 270 aaPredicted RBP11.57□□□□□ -0.56
SNX1-211ENST00000560829 MS4A15Q8N5U1 240 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 RPS4Y2Q8TD47 263 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 ADAMTS14Q8WXS8 1223 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 RELTQ969Z4 430 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 FER1L6-AS2Q96M78 137 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 KLHL15Q96M94 604 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 PIGQQ9BRB3 760 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 TSPAN10Q9H1Z9 355 aaPredicted RBP11.57□□□□□ -0.56
SNX1-211ENST00000560829 KCNN2Q9H2S1 579 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 TMEM185BQ9H7F4 350 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 ASCL3Q9NQ33 180 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 MRPS18CQ9Y3D5 142 aaKnown RBP11.57□□□□□ -0.56
SNX1-211ENST00000560829 TMEM14AQ9Y6G1 99 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 A0A0G2JMM0 328 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 IQCMA0A1B0GVH7 501 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 A0A1W2PNR3 127 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 A0A1W2PPB8 328 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 A0A1W2PRS3 328 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 TVP23AA6NH52 213 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 LRRC3CA6NJW4 275 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 AQP7P3A6NL99 342 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 KIR3DP1A8MWS1 328 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 CENPBD1B2RD01 187 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 PHYHO14832 338 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 SLC16A7O60669 478 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 CTLA4P16410 223 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 ALOX5APP20292 161 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 TCEA1P23193 301 aaKnown RBP11.56□□□□□ -0.56
SNX1-211ENST00000560829 OR2B6P58173 313 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 SLC35A1P78382 337 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 MRPL28Q13084 256 aaKnown RBP11.56□□□□□ -0.56
SNX1-211ENST00000560829 ABHD17BQ5VST6 288 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 RAET1LQ5VY80 246 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 RPL22L1Q6P5R6 122 aaKnown RBP11.56□□□□□ -0.56
SNX1-211ENST00000560829 ARL9Q6T311 187 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 RPTNQ6XPR3 784 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 PLEKHG7Q6ZR37 379 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 MARCH9Q86YJ5 346 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 PIAS4Q8N2W9 510 aaPredicted RBP11.56□□□□□ -0.56
SNX1-211ENST00000560829 SYT14Q8NB59 555 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 SMIM19Q96E16 107 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 JSRP1Q96MG2 331 aaPredicted RBP11.56□□□□□ -0.56
SNX1-211ENST00000560829 C6orf62Q9GZU0 229 aaPredicted RBP11.56□□□□□ -0.56
SNX1-211ENST00000560829 RERGLQ9H628 205 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 SNTG1Q9NSN8 517 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 ABI3Q9P2A4 366 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 CRNNQ9UBG3 495 aaPredicted RBP11.56□□□□□ -0.56
SNX1-211ENST00000560829 B3GNT3Q9Y2A9 372 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 GRIP1Q9Y3R0 1128 aa11.56□□□□□ -0.56
SNX1-211ENST00000560829 PRR32B1ATL7 298 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 TM4SF5O14894 197 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 MAGEB4O15481 346 aaPredicted RBP11.55□□□□□ -0.56
SNX1-211ENST00000560829 SULT1C4O75897 302 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 ABHD16AO95870 558 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 CNR1P21554 472 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 SDC2P34741 201 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 SFTPDP35247 375 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 PTGS2P35354 604 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 ETV6P41212 452 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 B3GALT5-AS1P59052 145 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 RAC1P63000 192 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 H3F3AP84243 136 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 OC90Q02509 493 aaPredicted RBP11.55□□□□□ -0.56
SNX1-211ENST00000560829 EGR3Q06889 387 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 TUBA3EQ6PEY2 450 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 DNM1P34Q6PK57 102 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 OTOSQ8NHW6 89 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 KIAA1143Q96AT1 154 aaPredicted RBP11.55□□□□□ -0.56
SNX1-211ENST00000560829 COL25A1Q9BXS0 654 aaPredicted RBP11.55□□□□□ -0.56
SNX1-211ENST00000560829 DEPPQ9NTK1 212 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 ACOXLQ9NUZ1 547 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 LRFN1Q9P244 771 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 GNG8Q9UK08 70 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 KLHDC2Q9Y2U9 406 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 PCNX3Q9H6A9 2034 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 HSPB2A8KAH6 182 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 J3QRK9 145 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 SULT2B1O00204 365 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 TAF4O00268 1085 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 TRAF3IP2O43734 574 aaPredicted RBP11.55□□□□□ -0.56
SNX1-211ENST00000560829 NEURL1O76050 574 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms