RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 RNF13O43567 381 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 CBLP22681 906 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 NTF4P34130 210 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 ARHGDIAP52565 204 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 RPL18Q07020 188 aaKnown RBP12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 LAPTM4AQ15012 233 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 TIMM23BQ5SRD1 257 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 TTC23Q5W5X9 447 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 FAM205BPQ63HN1 556 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 PODNL1Q6PEZ8 512 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 OAFQ86UD1 273 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 CXorf67Q86X51 503 aaPredicted RBP12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 OR4K5Q8NGD3 323 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 FNDC8Q8TC99 324 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 ZNF775Q96BV0 537 aaPredicted RBP12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 ALPK1Q96QP1 1244 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 FUZQ9BT04 418 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 ACTR6Q9GZN1 396 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 MCCC2Q9HCC0 563 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 OBP2BQ9NPH6 170 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 ANKHD1Q8IWZ3 2542 aaKnown RBP12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 SH3PXD2BA1X283 911 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 FAM221AA4D161 298 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 BLOC1S5-TXNDC5H3BN57 136 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 TNFRSF11BO00300 401 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 MITFO75030 526 aaPredicted RBP12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 HOXB1P14653 301 aaPredicted RBP12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 IGHV1-2P23083 117 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 IGFBP5P24593 272 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 SELENOPP49908 381 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 RAD23AP54725 363 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 FAPQ12884 760 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 KCTD21Q4G0X4 260 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 ALG10Q5BKT4 473 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 TSPO2Q5TGU0 170 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 NHLRC1Q6VVB1 395 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 SLC35D2Q76EJ3 337 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 BHLHA15Q7RTS1 189 aaPredicted RBP12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 KDM8Q8N371 416 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 LRRC17Q8N6Y2 441 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 ZNF433Q8N7K0 673 aaPredicted RBP12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 SLC25A44Q96H78 314 aaPredicted RBP12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 MUS81Q96NY9 551 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 OR2M2Q96R28 347 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 MRPS26Q9BYN8 205 aaKnown RBP12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 INIPQ9NRY2 104 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 SLC7A10Q9NS82 523 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 MYRFQ9Y2G1 1151 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 PKDREJQ9NTG1 2253 aa12.33□□□□□ -0.44
PKNOX1-209ENST00000560448 CIB4A0PJX0 185 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 SLC35F4A4IF30 521 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 TRIM64CA6NLI5 447 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 BCL10O95999 233 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 IGHMP01871 453 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 TFAP2AP05549 437 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 PTNP21246 168 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 FUT4P22083 530 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 CRYGSP22914 178 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 HOXC12P31275 282 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 OMPP47874 163 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 NR1H2P55055 460 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 ZBED5Q49AG3 693 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 FREM1Q5H8C1 2179 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 ZNF787Q6DD87 383 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 RPL13AP3Q6NVV1 102 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 CCDC36Q8IYA8 594 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 C20orf196Q8IYI0 205 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 TMEM123Q8N131 208 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 GPR137CQ8N3F9 429 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 GIPC3Q8TF64 312 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 ZNF566Q969W8 418 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 MUCL1Q96DR8 90 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 WFIKKN1Q96NZ8 548 aa12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 YTHDF1Q9BYJ9 559 aaKnown RBP12.32□□□□□ -0.44
PKNOX1-209ENST00000560448 TRBV4-1A0A0J9YWV2 114 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 LOC100130705A0A1B0GUX0 176 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 ARRDC5A6NEK1 342 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 OR5H1A6NKK0 313 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 A6NNC1 897 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 MCIDASD6RGH6 385 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 C11orf98E9PRG8 122 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 PIP5K1CO60331 668 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 IGHG1P01857 330 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 HLA-DOBP13765 273 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 IFNGR1P15260 489 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 MAKP20794 623 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 FPR3P25089 353 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 POLR2IP36954 125 aaKnown RBP12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 IL18R1Q13478 541 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 MICAQ29983 383 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 BEX5Q5H9J7 111 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 ZNF691Q5VV52 312 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 C1orf94Q6P1W5 598 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 THAP5Q7Z6K1 395 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 ZNF295-AS1Q8N0V1 137 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 ZNF555Q8NEP9 628 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 OR52J3Q8NH60 311 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 LINC01560Q8TB33 94 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 FBLIM1Q8WUP2 373 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 S100PBPQ96BU1 408 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms