RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 CDKN1AP38936 164 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 CSNK1A1P48729 337 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 BIDP55957 195 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 LSM11P83369 360 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 RPL18Q07020 188 aaKnown RBP13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 CAMK2DQ13557 499 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 KRT72Q14CN4 511 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 GLYATQ6IB77 296 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 ZNF544Q6NX49 715 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 PRIMA1Q86XR5 153 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 OR6N1Q8NGY5 312 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 FAM162AQ96A26 154 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 SLC38A2Q96QD8 506 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 KATNB1Q9BVA0 655 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 ULBP2Q9BZM5 246 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 ADA2Q9NZK5 511 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 CD300AQ9UGN4 299 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 EGFL7Q9UHF1 273 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 ENPP4Q9Y6X5 453 aa13.21□□□□□ -0.29
SNRPA1-210ENST00000560383 CENPBD1B2RD01 187 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 BLOC1S5-TXNDC5H3BN57 136 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 FAM107AO95990 144 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 BCL10O95999 233 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 IGHV4-39P01824 125 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 PGA4P0DJD7 388 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 PGA3P0DJD8 388 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 AQP2P41181 271 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 YAP1P46937 504 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 TRAM2Q15035 370 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 HIST3H3Q16695 136 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 SPATS1Q496A3 300 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 AGAP6Q5VW22 663 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 C11orf71Q6IPW1 123 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 FKBP9P1Q75LS8 142 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 RNF113BQ8IZP6 322 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 FITM2Q8N6M3 262 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 RNF148Q8N7C7 305 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 ACOT11Q8WXI4 607 aaPredicted RBP13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 ZNF566Q969W8 418 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 BPIFA2Q96DR5 249 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 FNDC11Q9BVV2 318 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 MRPL13Q9BYD1 178 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 REG4Q9BYZ8 158 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 ANKRD19PQ9H560 264 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 NDE1Q9NXR1 346 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 B3GNT2Q9NY97 397 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 GLTPQ9NZD2 209 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 POU2F3Q9UKI9 436 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 HIF3AQ9Y2N7 669 aa13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 CHD3Q12873 2000 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-210ENST00000560383 A0A087WUU8 490 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 ZNF503-AS2A6NEH8 195 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 RNF223E7ERA6 249 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 ATP6V1G2-DDX39BF2Z307 99 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 PIP5K1CO60331 668 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 CECR9P0C854 216 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 ARR3P36575 388 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 ACVR1BP36896 505 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 MNAT1P51948 309 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 TUBA1BP68363 451 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 TUBA4AP68366 448 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 PRKCDQ05655 676 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 ANKDD1AQ495B1 522 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 SAMD4BQ5PRF9 694 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 GKAP1Q5VSY0 366 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 LRFN4Q6PJG9 635 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 TUBA1AQ71U36 451 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 RBM15BQ8NDT2 890 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 C7orf34Q96L11 122 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 FOXB1Q99853 325 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 NMNAT1Q9HAN9 279 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 INIPQ9NRY2 104 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 CBLN4Q9NTU7 201 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 NDUFAF4Q9P032 175 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 RHCGQ9UBD6 479 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 SAMD4AQ9UPU9 718 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 MOKQ9UQ07 419 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 POFUT2Q9Y2G5 429 aa13.19□□□□□ -0.3
SNRPA1-210ENST00000560383 A0A1W2PRG6 482 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 A0A1W2PRQ8 180 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 IGHG1P01857 330 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 CRYAAP02489 173 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 SEMG1P04279 462 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 F13BP05160 661 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 IFI30P13284 250 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 MAKP20794 623 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 DAP3P51398 398 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 ZNF133P52736 654 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 NAAAQ02083 359 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 RUNX1T1Q06455 604 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 FHL1Q13642 323 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 DGCR6Q14129 220 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 MELKQ14680 651 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 IQCCQ4KMZ1 466 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 ARMC4Q5T2S8 1044 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 C16orf89Q6UX73 402 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 ZNF813Q6ZN06 617 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 TMPRSS11FQ6ZWK6 438 aa13.18□□□□□ -0.3
SNRPA1-210ENST00000560383 MBOAT2Q6ZWT7 520 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms