RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 MYL9P24844 172 aa16.02■□□□□ 0.16
SNX1-208ENST00000559844 GTF2E2P29084 291 aaKnown RBP16.02■□□□□ 0.16
SNX1-208ENST00000559844 HCCSP53701 268 aa16.02■□□□□ 0.16
SNX1-208ENST00000559844 MFSD13AQ14CX5 517 aa16.02■□□□□ 0.16
SNX1-208ENST00000559844 C1QL3Q5VWW1 255 aa16.02■□□□□ 0.16
SNX1-208ENST00000559844 RPL22L1Q6P5R6 122 aaKnown RBP16.02■□□□□ 0.16
SNX1-208ENST00000559844 LYPD8Q6UX82 237 aa16.02■□□□□ 0.16
SNX1-208ENST00000559844 PAMR1Q6UXH9 720 aa16.02■□□□□ 0.16
SNX1-208ENST00000559844 ELP5Q8TE02 316 aa16.02■□□□□ 0.16
SNX1-208ENST00000559844 PGLYRP3Q96LB9 341 aa16.02■□□□□ 0.16
SNX1-208ENST00000559844 MNTQ99583 582 aa16.02■□□□□ 0.16
SNX1-208ENST00000559844 PPP4R1LQ9P1A2 415 aa16.02■□□□□ 0.16
SNX1-208ENST00000559844 V9GYH0 126 aa16.02■□□□□ 0.16
SNX1-208ENST00000559844 FUOMA2VDF0 154 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 K7ENP7 123 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 SERPINA7P05543 415 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 BCAP31P51572 246 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 MAP2K6P52564 334 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 SIRPAP78324 504 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 AIMP2Q13155 320 aaKnown RBP16.02■□□□□ 0.15
SNX1-208ENST00000559844 CDK5R1Q15078 307 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 INO80CQ6PI98 192 aaPredicted RBP16.02■□□□□ 0.15
SNX1-208ENST00000559844 TPRA1Q86W33 373 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 RFLNBQ8N5W9 214 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 POC5Q8NA72 575 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 TEX19Q8NA77 164 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 HAVCR2Q8TDQ0 301 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 ACOT12Q8WYK0 555 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 SMIM19Q96E16 107 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 PELI1Q96FA3 418 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 MIXL1Q9H2W2 232 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 GNG8Q9UK08 70 aa16.02■□□□□ 0.15
SNX1-208ENST00000559844 OR2J2O76002 312 aa16.01■□□□□ 0.15
SNX1-208ENST00000559844 PTTG1O95997 202 aa16.01■□□□□ 0.15
SNX1-208ENST00000559844 ITGA3P26006 1051 aa16.01■□□□□ 0.15
SNX1-208ENST00000559844 GRPRP30550 384 aa16.01■□□□□ 0.15
SNX1-208ENST00000559844 INSL4Q14641 139 aa16.01■□□□□ 0.15
SNX1-208ENST00000559844 KCTD20Q7Z5Y7 419 aa16.01■□□□□ 0.15
SNX1-208ENST00000559844 ZNF554Q86TJ5 538 aa16.01■□□□□ 0.15
SNX1-208ENST00000559844 THOC3Q96J01 351 aaKnown RBP16.01■□□□□ 0.15
SNX1-208ENST00000559844 METTL7AQ9H8H3 244 aa16.01■□□□□ 0.15
SNX1-208ENST00000559844 GALNT9Q9HCQ5 603 aa16.01■□□□□ 0.15
SNX1-208ENST00000559844 MRPL39Q9NYK5 338 aaKnown RBP16.01■□□□□ 0.15
SNX1-208ENST00000559844 ADAM30Q9UKF2 790 aa16.01■□□□□ 0.15
SNX1-208ENST00000559844 COPS3Q9UNS2 423 aa16.01■□□□□ 0.15
SNX1-208ENST00000559844 EXPH5Q8NEV8 1989 aa16.01■□□□□ 0.15
SNX1-208ENST00000559844 IGLV3-32A0A0A0MS00 114 aa16■□□□□ 0.15
SNX1-208ENST00000559844 C11orf98E9PRG8 122 aa16■□□□□ 0.15
SNX1-208ENST00000559844 ZNF208O43345 1280 aa16■□□□□ 0.15
SNX1-208ENST00000559844 SC5DO75845 299 aa16■□□□□ 0.15
SNX1-208ENST00000559844 IGHMP01871 453 aa16■□□□□ 0.15
SNX1-208ENST00000559844 ACVR1BP36896 505 aa16■□□□□ 0.15
SNX1-208ENST00000559844 CENPAP49450 140 aa16■□□□□ 0.15
SNX1-208ENST00000559844 RPL27P61353 136 aaKnown RBP16■□□□□ 0.15
SNX1-208ENST00000559844 MRPL28Q13084 256 aaKnown RBP16■□□□□ 0.15
SNX1-208ENST00000559844 NTRK2Q16620 822 aa16■□□□□ 0.15
SNX1-208ENST00000559844 EEF1A1P5Q5VTE0 462 aa16■□□□□ 0.15
SNX1-208ENST00000559844 SLC6A19Q695T7 634 aa16■□□□□ 0.15
SNX1-208ENST00000559844 OR5M10Q6IEU7 315 aa16■□□□□ 0.15
SNX1-208ENST00000559844 RPTNQ6XPR3 784 aa16■□□□□ 0.15
SNX1-208ENST00000559844 CEACAM19Q7Z692 300 aa16■□□□□ 0.15
SNX1-208ENST00000559844 GHSRQ92847 366 aa16■□□□□ 0.15
SNX1-208ENST00000559844 DIRAS2Q96HU8 199 aa16■□□□□ 0.15
SNX1-208ENST00000559844 SDHCQ99643 169 aaPredicted RBP16■□□□□ 0.15
SNX1-208ENST00000559844 ATF6BQ99941 703 aa16■□□□□ 0.15
SNX1-208ENST00000559844 SRA1Q9HD15 236 aaKnown RBP16■□□□□ 0.15
SNX1-208ENST00000559844 MED11Q9P086 117 aa16■□□□□ 0.15
SNX1-208ENST00000559844 GRIP1Q9Y3R0 1128 aa16■□□□□ 0.15
SNX1-208ENST00000559844 MAP1BP46821 2468 aaKnown RBP16■□□□□ 0.15
SNX1-208ENST00000559844 SHISA3A0PJX4 238 aa16■□□□□ 0.15
SNX1-208ENST00000559844 SMIM30A4D0T7 59 aa16■□□□□ 0.15
SNX1-208ENST00000559844 ANKRD33BA6NCL7 494 aa16■□□□□ 0.15
SNX1-208ENST00000559844 C2orf72A6NCS6 295 aa16■□□□□ 0.15
SNX1-208ENST00000559844 ETV2O00321 342 aaPredicted RBP16■□□□□ 0.15
SNX1-208ENST00000559844 ARHGEF9O43307 516 aa16■□□□□ 0.15
SNX1-208ENST00000559844 TACSTD2P09758 323 aa16■□□□□ 0.15
SNX1-208ENST00000559844 AHCYP23526 432 aa16■□□□□ 0.15
SNX1-208ENST00000559844 GDI2P50395 445 aaKnown RBP16■□□□□ 0.15
SNX1-208ENST00000559844 ACSM3Q53FZ2 586 aa16■□□□□ 0.15
SNX1-208ENST00000559844 XKRXQ6PP77 449 aa16■□□□□ 0.15
SNX1-208ENST00000559844 FAM131AQ6UXB0 335 aa16■□□□□ 0.15
SNX1-208ENST00000559844 PXKQ7Z7A4 578 aa16■□□□□ 0.15
SNX1-208ENST00000559844 DDIT4LQ96D03 193 aa16■□□□□ 0.15
SNX1-208ENST00000559844 SPACA9Q96E40 222 aaPredicted RBP16■□□□□ 0.15
SNX1-208ENST00000559844 TTTY10Q9BZA0 68 aa16■□□□□ 0.15
SNX1-208ENST00000559844 TXNIPQ9H3M7 391 aa16■□□□□ 0.15
SNX1-208ENST00000559844 RHBDL2Q9NX52 303 aa16■□□□□ 0.15
SNX1-208ENST00000559844 WIF1Q9Y5W5 379 aa16■□□□□ 0.15
SNX1-208ENST00000559844 KCNMB2Q9Y691 235 aa16■□□□□ 0.15
SNX1-208ENST00000559844 FABP12A6NFH5 140 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 FAM171A2A8MVW0 826 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 FTCDNL1E5RQL4 147 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 PLPP3O14495 311 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 GPRIN2O60269 458 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 EDNRAP25101 427 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 ZNF41P51814 821 aaPredicted RBP15.99■□□□□ 0.15
SNX1-208ENST00000559844 CAV3P56539 151 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 CXADRP78310 365 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 GLYR1Q49A26 553 aaPredicted RBP15.99■□□□□ 0.15
SNX1-208ENST00000559844 SLC25A53Q5H9E4 307 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms