RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ABCD2Q9UBJ2 740 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 STAP1Q9ULZ2 295 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 RNF24Q9Y225 148 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 KIF25-AS1Q9Y6Z4 181 aa2.78□□□□□ -1.96
SPG11-218ENST00000559754 LOC110117498-PIK3R3F6TDL0 507 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 DCTN6O00399 190 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 SLC17A2O00624 439 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 HSBP1O75506 76 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 FARS2O95363 451 aaKnown RBP2.77□□□□□ -1.97
SPG11-218ENST00000559754 IFNW1P05000 195 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 KLK2P20151 261 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 FASP25445 335 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 CFHR2P36980 270 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 RPL34P49207 117 aaKnown RBP2.77□□□□□ -1.97
SPG11-218ENST00000559754 SSR4P51571 173 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 PLK1P53350 603 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 GPX6P59796 221 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 LYZP61626 148 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 TPM4P67936 248 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 PAX2Q02962 417 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 RUNX3Q13761 415 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 COTL1Q14019 142 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 SF3A2Q15428 464 aaKnown RBP2.77□□□□□ -1.97
SPG11-218ENST00000559754 SIX1Q15475 284 aaPredicted RBP2.77□□□□□ -1.97
SPG11-218ENST00000559754 C18orf21Q32NC0 220 aaPredicted RBP2.77□□□□□ -1.97
SPG11-218ENST00000559754 PRR30Q53SZ7 412 aaPredicted RBP2.77□□□□□ -1.97
SPG11-218ENST00000559754 SOHLH1Q5JUK2 328 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 SAMD4BQ5PRF9 694 aaKnown RBP2.77□□□□□ -1.97
SPG11-218ENST00000559754 PPM1LQ5SGD2 360 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 C9orf66Q5T8R8 295 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 OR2G6Q5TZ20 316 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 GPR107Q5VW38 600 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 RFWD3Q6PCD5 774 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 ASCL5Q7RTU5 278 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 FAM122BQ7Z309 247 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 ZNF100Q8IYN0 542 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 MYOCDQ8IZQ8 938 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 FAM9CQ8IZT9 166 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 ARHGAP18Q8N392 663 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 FNDC5Q8NAU1 212 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 OR1S2Q8NGQ3 325 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 OR56B4Q8NH76 319 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 LYPD6BQ8NI32 183 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 GLT1D1Q96MS3 346 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 SORT1Q99523 831 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 ECSITQ9BQ95 431 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 TMEM59Q9BXS4 323 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 UCK2Q9BZX2 261 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 ACTR3CQ9C0K3 210 aaPredicted RBP2.77□□□□□ -1.97
SPG11-218ENST00000559754 DMAP1Q9NPF5 467 aaPredicted RBP2.77□□□□□ -1.97
SPG11-218ENST00000559754 ABCB10Q9NRK6 738 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 SAMSN1Q9NSI8 373 aaKnown RBP2.77□□□□□ -1.97
SPG11-218ENST00000559754 ADA2Q9NZK5 511 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 STX18Q9P2W9 335 aaKnown RBP2.77□□□□□ -1.97
SPG11-218ENST00000559754 SPRR3Q9UBC9 169 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 PRO0461Q9UI25 63 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 RBMX2Q9Y388 322 aaKnown RBP2.77□□□□□ -1.97
SPG11-218ENST00000559754 KPTNQ9Y664 436 aa2.77□□□□□ -1.97
SPG11-218ENST00000559754 RLFQ13129 1914 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 RAB19A4D1S5 217 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 ZNF705EA8MWA4 302 aaPredicted RBP2.76□□□□□ -1.97
SPG11-218ENST00000559754 E7EWF7 191 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 E9PAM4 449 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 G3V3Y1 287 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 H7C0C1 242 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 K7ENP7 123 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 CCL21O00585 134 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 GPX5O75715 221 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 ETHE1O95571 254 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 CD160O95971 181 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 IGHV2-5P01817 119 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 PIGRP01833 764 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 THY1P04216 161 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 TPM3P06753 285 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 NR2C1P13056 603 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 HPGDP15428 266 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 CTRB1P17538 263 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 PMCHP20382 165 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 NPR2P20594 1047 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 IDSP22304 550 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 EPHX2P34913 555 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 HTR2BP41595 481 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 RPL29P47914 159 aaKnown RBP2.76□□□□□ -1.97
SPG11-218ENST00000559754 ADARB1P78563 741 aaKnown RBP2.76□□□□□ -1.97
SPG11-218ENST00000559754 SLC10A7Q0GE19 358 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 ARL6IP1Q15041 203 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 LTB4RQ15722 352 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 PSG3Q16557 428 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 ATAD3CQ5T2N8 411 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 C6orf183Q5T699 404 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 SPECC1LQ69YQ0 1117 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 CTRB2Q6GPI1 263 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 EMBQ6PCB8 327 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 SLC35D2Q76EJ3 337 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 NDUFAF7Q7L592 441 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 PID1Q7Z2X4 250 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 CMC1Q7Z7K0 106 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 PLA2G4DQ86XP0 818 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 LRRC49Q8IUZ0 686 aa2.76□□□□□ -1.97
SPG11-218ENST00000559754 C9orf40Q8IXQ3 194 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms