RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 LIX1LQ8IVB5 337 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 OR6F1Q8NGZ6 308 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 RNASE11Q8TAA1 199 aaKnown RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 SLC7A13Q8TCU3 470 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 BRIX1Q8TDN6 353 aaKnown RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 OR11A1Q9GZK7 315 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 CCDC86Q9H6F5 360 aaKnown RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 PARPBPQ9NWS1 579 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 RASD1Q9Y272 281 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 TRBV2A0A0J9YWF9 115 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 A0A1W2PNR3 127 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 A0A1W2PS29 197 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 B4DXG7 233 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 EEF1E1-BLOC1S5C9J1V9 151 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 NAT1P18440 290 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 ABCD3P28288 659 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 SLC1A3P43003 542 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 WNT3P56703 355 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 RAB40BQ12829 278 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 GRK1Q15835 563 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 FAM76BQ5HYJ3 339 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 B3GLCTQ6Y288 498 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 MBOAT2Q6ZWT7 520 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 STX12Q86Y82 276 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF501Q96CX3 271 aaPredicted RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 METTL17Q9H7H0 456 aaPredicted RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 CDH20Q9HBT6 801 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 CHRNA9Q9UGM1 479 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 CACNA1BQ00975 2339 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 TCF20Q9UGU0 1960 aaKnown RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 IGKV1-8A0A0C4DH67 115 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 C13orf42A0A1B0GVH6 325 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 H7C1C5 153 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 FOXS1O43638 330 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 CHP2O43745 196 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 LCATP04180 440 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 ENPP1P22413 925 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 LCN6P62502 163 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 RPS25P62851 125 aaKnown RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 POU4F2Q12837 409 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 ASAH1Q13510 395 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 TRAM1Q15629 374 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 BAK1Q16611 211 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 FAM69AQ5T7M9 428 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 NIPAL3Q6P499 406 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 BCDIN3DQ7Z5W3 292 aaKnown RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 PTOV1Q86YD1 416 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 SPRYD4Q8WW59 207 aaPredicted RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 TTC9Q92623 222 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 SCARF2Q96GP6 870 aaPredicted RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 OR2M2Q96R28 347 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 SLC38A1Q9H2H9 487 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 BCL2L10Q9HD36 194 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 GLS2Q9UI32 602 aa9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 NOSIPQ9Y314 301 aaKnown RBP9.73□□□□□ -0.85
CARMIL3-202ENST00000559694 COL4A6Q14031 1691 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 PATJQ8NI35 1801 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 TRABD2BA6NFA1 517 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 CT62P0C5K7 136 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 CSF2RBP32927 897 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 PGGHGQ32M88 737 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 ZMAT1Q5H9K5 638 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 METTL11BQ5VVY1 283 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 C5orf46Q6UWT4 87 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 BTN2A1Q7KYR7 527 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 STOML3Q8TAV4 291 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF71Q9NQZ8 489 aaPredicted RBP9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 MYOTQ9UBF9 498 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 TEX46H3BTG2 121 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 EIF1BO60739 113 aaKnown RBP9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 AKR7A3O95154 331 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 SERPINA7P05543 415 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 GP1BAP07359 652 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 GTF2F2P13984 249 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 ELAVL4P26378 380 aaKnown RBP9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 METAP1DQ6UB28 335 aaPredicted RBP9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 OR2L13Q8N349 312 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 GALNT16Q8N428 558 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 POGLUT1Q8NBL1 392 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 NANOS1Q8WY41 292 aaKnown RBP9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF639Q9UID6 485 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 METTL21EPA6NDL7 271 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 A6NLC8 198 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF705EA8MWA4 302 aaPredicted RBP9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 ARPC1BO15143 372 aaKnown RBP9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 MT-ND4P03905 459 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 RLN2P04090 185 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 HTR2AP28223 471 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 PTPN6P29350 595 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 HOXA6P31267 233 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 OR1C1Q15619 314 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 PRICKLE4Q2TBC4 344 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 B3GNTL1Q67FW5 361 aaPredicted RBP9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 ALKAL2Q6UX46 152 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 UNQ6126/PRO20091Q6UXV3 157 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 LRRC28Q86X40 367 aaPredicted RBP9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 MS4A15Q8N5U1 240 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 CASTOR1Q8WTX7 329 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF285Q96NJ3 590 aa9.72□□□□□ -0.85
CARMIL3-202ENST00000559694 GPR87Q9BY21 358 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms