RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 PEX19P40855 299 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 RAP1BP61224 184 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 RAP1AP62834 184 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 ROR2Q01974 943 aaKnown RBP19.09■□□□□ 0.65
SNX1-206ENST00000559389 ANKRD34AQ69YU3 496 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 GPR139Q6DWJ6 353 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 ZNF433Q8N7K0 673 aaPredicted RBP19.09■□□□□ 0.65
SNX1-206ENST00000559389 ARIH2OSQ8N7S6 290 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 ATG16L2Q8NAA4 619 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 ICA1LQ8NDH6 482 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 OR52L1Q8NGH7 329 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 OR6N1Q8NGY5 312 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 HDAC2Q92769 488 aaKnown RBP19.09■□□□□ 0.65
SNX1-206ENST00000559389 KISS1RQ969F8 398 aaPredicted RBP19.09■□□□□ 0.65
SNX1-206ENST00000559389 Q96M85 177 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 ULBP2Q9BZM5 246 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 OR10A4Q9H209 315 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 ZNF556Q9HAH1 456 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 KIF17Q9P2E2 1029 aa19.09■□□□□ 0.65
SNX1-206ENST00000559389 TEX13CA0A0J9YWL9 993 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 SAC3D1A6NKF1 404 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 M0R3G1 203 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 ARPC3O15145 178 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 TXNDC12O95881 172 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 ACVR1BP36896 505 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 KRR1Q13601 381 aaKnown RBP19.08■□□□□ 0.64
SNX1-206ENST00000559389 TSC22D1Q15714 1073 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 HIST3H3Q16695 136 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 MESTQ5EB52 335 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 MAGEE2Q8TD90 523 aaPredicted RBP19.08■□□□□ 0.64
SNX1-206ENST00000559389 NMD3Q96D46 503 aaKnown RBP19.08■□□□□ 0.64
SNX1-206ENST00000559389 KCNK17Q96T54 332 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 B3GAT2Q9NPZ5 323 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 TBC1D23Q9NUY8 699 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 GLTPQ9NZD2 209 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 GRHPRQ9UBQ7 328 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 IER3IP1Q9Y5U9 82 aa19.08■□□□□ 0.64
SNX1-206ENST00000559389 BHLHE40O14503 412 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 IGFBP1P08833 259 aaPredicted RBP19.07■□□□□ 0.64
SNX1-206ENST00000559389 IL32P24001 234 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 DAPP51397 102 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 RPS6KA3P51812 740 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 CLRN1P58418 232 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 SNTB1Q13884 538 aaKnown RBP19.07■□□□□ 0.64
SNX1-206ENST00000559389 SLC36A3Q495N2 470 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 CLEC12AQ5QGZ9 265 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 C9orf135Q5VTT2 229 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 BHLHA15Q7RTS1 189 aaPredicted RBP19.07■□□□□ 0.64
SNX1-206ENST00000559389 DMRTC2Q8IXT2 367 aaPredicted RBP19.07■□□□□ 0.64
SNX1-206ENST00000559389 C1orf162Q8NEQ5 155 aaPredicted RBP19.07■□□□□ 0.64
SNX1-206ENST00000559389 STEAP2Q8NFT2 490 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 RASD2Q96D21 266 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 ALG12Q9BV10 488 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 IFT27Q9BW83 186 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 HDHD5Q9BXW7 423 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 ACTR6Q9GZN1 396 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 CRLF2Q9HC73 371 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 GPR35Q9HC97 309 aa19.07■□□□□ 0.64
SNX1-206ENST00000559389 IMPA2O14732 288 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 RAD51DO75771 328 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 NR2C1P13056 603 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 OSMP13725 252 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 ZNF133P52736 654 aaPredicted RBP19.06■□□□□ 0.64
SNX1-206ENST00000559389 SH3BGRP55822 239 aaPredicted RBP19.06■□□□□ 0.64
SNX1-206ENST00000559389 ELF3P78545 371 aaPredicted RBP19.06■□□□□ 0.64
SNX1-206ENST00000559389 STK11Q15831 433 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 CEACAM16Q2WEN9 425 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 MEX3BQ6ZN04 569 aaKnown RBP19.06■□□□□ 0.64
SNX1-206ENST00000559389 ADCK1Q86TW2 530 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 PARP8Q8N3A8 854 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 SYT14Q8NB59 555 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 TEX47Q8TBZ9 253 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 S100PBPQ96BU1 408 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 ERMAPQ96PL5 475 aaPredicted RBP19.06■□□□□ 0.64
SNX1-206ENST00000559389 SPOCK3Q9BQ16 436 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 PAPOLBQ9NRJ5 636 aaKnown RBP19.06■□□□□ 0.64
SNX1-206ENST00000559389 POFUT2Q9Y2G5 429 aa19.06■□□□□ 0.64
SNX1-206ENST00000559389 SPTBN1Q01082 2364 aaKnown RBP19.06■□□□□ 0.64
SNX1-206ENST00000559389 DOPEY2Q9Y3R5 2298 aa19.05■□□□□ 0.64
SNX1-206ENST00000559389 PPP3CBP16298 524 aa19.05■□□□□ 0.64
SNX1-206ENST00000559389 PPP2R2BQ00005 443 aa19.05■□□□□ 0.64
SNX1-206ENST00000559389 TGFBR3Q03167 851 aa19.05■□□□□ 0.64
SNX1-206ENST00000559389 CD47Q08722 323 aa19.05■□□□□ 0.64
SNX1-206ENST00000559389 RCN1Q15293 331 aa19.05■□□□□ 0.64
SNX1-206ENST00000559389 KDM4DQ6B0I6 523 aa19.05■□□□□ 0.64
SNX1-206ENST00000559389 ZNF771Q7L3S4 317 aaPredicted RBP19.05■□□□□ 0.64
SNX1-206ENST00000559389 OR4Q3Q8NH05 313 aa19.05■□□□□ 0.64
SNX1-206ENST00000559389 ZNF837Q96EG3 531 aaPredicted RBP19.05■□□□□ 0.64
SNX1-206ENST00000559389 TSSK6Q9BXA6 273 aa19.05■□□□□ 0.64
SNX1-206ENST00000559389 SMURF2Q9HAU4 748 aa19.05■□□□□ 0.64
SNX1-206ENST00000559389 CIB4A0PJX0 185 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 TUBAL3A6NHL2 446 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 H3BN98 237 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 H7C1C5 153 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 SOCS2O14508 198 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 XKRYO14609 159 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 ARHGEF9O43307 516 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 IDH3BO43837 385 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 LCN6P62502 163 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 FMODQ06828 376 aa19.04■□□□□ 0.64
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