RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 RPS6KA3P51812 740 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 BIDP55957 195 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 ERVK-25P63136 954 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 TFF3Q07654 80 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 C1DQ13901 141 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 PGGHGQ32M88 737 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 PHYHD1Q5SRE7 291 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 TSPO2Q5TGU0 170 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 C12orf73Q69YU5 71 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 ZNF627Q7L945 461 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 LINGO2Q7L985 606 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 AAED1Q7RTV5 226 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 MRGPRGQ86SM5 289 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 CCDC71Q8IV32 467 aaPredicted RBP13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 GABRG1Q8N1C3 465 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 OR2T33Q8NG76 320 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 ASB5Q8WWX0 329 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 HRASLS5Q96KN8 279 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 PITX2Q99697 317 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 ALG12Q9BV10 488 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 EMC6Q9BV81 110 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 TSSK6Q9BXA6 273 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 POLDIP3Q9BY77 421 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 NMNAT2Q9BZQ4 307 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 NDEL1Q9GZM8 345 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 CMC2Q9NRP2 79 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 KIF17Q9P2E2 1029 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 IER3IP1Q9Y5U9 82 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 A6NIZ1 184 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 SLC16A6O15403 523 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 AKAP8O43823 692 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 ACADSP16219 412 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 RAD23AP54725 363 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 PER3P56645 1201 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 RAP1BP61224 184 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 RAP1AP62834 184 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 MELKQ14680 651 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 GINS1Q14691 196 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 SLC25A35Q3KQZ1 300 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 C10orf128Q5T292 105 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 FBXW9Q5XUX1 488 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 SLC27A4Q6P1M0 643 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 LRFN4Q6PJG9 635 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 ZNF474Q6S9Z5 364 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 Q6ZT83 130 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 PTCHD4Q6ZW05 846 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 HDDC2Q7Z4H3 204 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 ADCK1Q86TW2 530 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 POMGNT2Q8NAT1 580 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 NPEPL1Q8NDH3 523 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 OR52L1Q8NGH7 329 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 TEX47Q8TBZ9 253 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 RASD2Q96D21 266 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 PSMG3-AS1Q96PY0 264 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 SLCO5A1Q9H2Y9 848 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 SLC7A10Q9NS82 523 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 TBC1D23Q9NUY8 699 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 NDRG4Q9ULP0 352 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 MYO9AB2RTY4 2548 aa13.07□□□□□ -0.32
SNRPA1-207ENST00000559309 TEX13CA0A0J9YWL9 993 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 SLC22A23A1A5C7 686 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 PRSS37A4D1T9 235 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 DVL2O14641 736 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 SURF4O15260 269 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 SLC43A1O75387 559 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 UPK3AO75631 287 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 SNAP29O95721 258 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 HIST1H1CP16403 213 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 RPL4P36578 427 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 ACVR1BP36896 505 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 CDKN2AP42771 156 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 PTDSS1P48651 473 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 SIRPAP78324 504 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 ADARB1P78563 741 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 KRR1Q13601 381 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 CLEC12AQ5QGZ9 265 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 NIPAL3Q6P499 406 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 XKRXQ6PP77 449 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 FOXL2NBQ6ZUU3 175 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 ZNF808Q8N4W9 903 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 FAM26EQ8N5C1 309 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 CNEP1R1Q8N9A8 125 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 ZNF610Q8N9Z0 462 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 ACBD4Q8NC06 268 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 NOXO1Q8NFA2 376 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 FNDC8Q8TC99 324 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 APH1AQ96BI3 265 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 ZNF570Q96NI8 536 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 ERMAPQ96PL5 475 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 IFT27Q9BW83 186 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 RASSF4Q9H2L5 321 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 TOR3AQ9H497 397 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 SMPD3Q9NY59 655 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 GLTPQ9NZD2 209 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 GRHPRQ9UBQ7 328 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 PRSS50Q9UI38 385 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 PROCRQ9UNN8 238 aa13.06□□□□□ -0.32
SNRPA1-207ENST00000559309 DIDO1Q9BTC0 2240 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 UTP20O75691 2785 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 HCFC1P51610 2035 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms