RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 PACSIN2Q9UNF0 486 aaPredicted RBP7.53□□□□□ -1.2
CASC4-208ENST00000559151 ZNF318Q5VUA4 2279 aa7.53□□□□□ -1.2
CASC4-208ENST00000559151 CNTNAP1P78357 1384 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 CDH16O75309 829 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 KRT6AP02538 564 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 YWHAGP61981 247 aaKnown RBP eCLIP7.52□□□□□ -1.21
CASC4-208ENST00000559151 ZNF92Q03936 586 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 VAX1Q5SQQ9 334 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 CCDC73Q6ZRK6 1079 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 HSD17B11Q8NBQ5 300 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 OR1N2Q8NGR9 330 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 FAM81AQ8TBF8 368 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 C20orf24Q9BUV8 137 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 CLMPQ9H6B4 373 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 UGT1A7Q9HAW7 530 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 UGT1A10Q9HAW8 530 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 UGT1A8Q9HAW9 530 aa7.52□□□□□ -1.21
CASC4-208ENST00000559151 ZNF726A6NNF4 738 aa7.51□□□□□ -1.21
CASC4-208ENST00000559151 EIF3GO75821 320 aaKnown RBP eCLIP7.51□□□□□ -1.21
CASC4-208ENST00000559151 H6PDO95479 791 aa7.51□□□□□ -1.21
CASC4-208ENST00000559151 CSF3P09919 207 aa7.51□□□□□ -1.21
CASC4-208ENST00000559151 HPGDP15428 266 aa7.51□□□□□ -1.21
CASC4-208ENST00000559151 TNNT2P45379 298 aaPredicted RBP7.51□□□□□ -1.21
CASC4-208ENST00000559151 TMED10P49755 219 aaKnown RBP7.51□□□□□ -1.21
CASC4-208ENST00000559151 RORCP51449 518 aa7.51□□□□□ -1.21
CASC4-208ENST00000559151 UGT2B15P54855 530 aa7.51□□□□□ -1.21
CASC4-208ENST00000559151 FGF8P55075 233 aaPredicted RBP7.51□□□□□ -1.21
CASC4-208ENST00000559151 WNT4P56705 351 aa7.51□□□□□ -1.21
CASC4-208ENST00000559151 RHEBL1Q8TAI7 183 aa7.51□□□□□ -1.21
CASC4-208ENST00000559151 TMEM54Q969K7 222 aa7.51□□□□□ -1.21
CASC4-208ENST00000559151 OR51M1Q9H341 326 aa7.51□□□□□ -1.21
CASC4-208ENST00000559151 ADAM22Q9P0K1 906 aa7.51□□□□□ -1.21
CASC4-208ENST00000559151 SERTM2A0A1B0GWG4 89 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 SMCO2A6NFE2 343 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 EIF3HO15372 352 aaKnown RBP eCLIP7.5□□□□□ -1.21
CASC4-208ENST00000559151 TDGF1P13385 188 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 ZNF17P17021 662 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 NUDT1P36639 197 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 NAA10P41227 235 aaPredicted RBP7.5□□□□□ -1.21
CASC4-208ENST00000559151 TDGF1P3P51864 188 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 PDIK1LQ8N165 341 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 FAM71E2Q8N5Q1 922 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 FBXL13Q8NEE6 735 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 GCNT4Q9P109 453 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 ZNF225Q9UK10 706 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 KIAA1257Q9ULG3 409 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 TRAPPC4Q9Y296 219 aa7.5□□□□□ -1.21
CASC4-208ENST00000559151 USP47Q96K76 1375 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 TRBV11-1A0A0K0K1C0 115 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 LRRIQ3A6PVS8 624 aaPredicted RBP7.49□□□□□ -1.21
CASC4-208ENST00000559151 CLIC3O95833 236 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 IGHV4-34P06331 123 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 CCNE1P24864 410 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 C21orf59P57076 290 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 RGS8P57771 180 aaPredicted RBP7.49□□□□□ -1.21
CASC4-208ENST00000559151 KRTAP10-5P60370 271 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 AQP6Q13520 282 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 COX15Q7KZN9 410 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 CENPQQ7L2Z9 268 aaPredicted RBP7.49□□□□□ -1.21
CASC4-208ENST00000559151 NPBQ8NG41 125 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 OR4C5Q8NGB2 326 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 OR2G3Q8NGZ4 309 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 OR2M2Q96R28 347 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 TGS1Q96RS0 853 aaKnown RBP7.49□□□□□ -1.21
CASC4-208ENST00000559151 NEUROG2Q9H2A3 272 aa7.49□□□□□ -1.21
CASC4-208ENST00000559151 A0A1B0GVI7 797 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 PANO1I0J062 215 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 SLC31A2O15432 143 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 DNAJB6O75190 326 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 ACTA2P62736 377 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 ACTG2P63267 376 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 ACTC1P68032 377 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 ACTA1P68133 377 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 BZW1Q7L1Q6 419 aaKnown RBP7.48□□□□□ -1.21
CASC4-208ENST00000559151 LIX1Q8N485 282 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 OR10G9Q8NGN4 311 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 CXorf40AQ8TE69 158 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 NRTNQ99748 197 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 EXO5Q9H790 373 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 CELA1Q9UNI1 258 aa7.48□□□□□ -1.21
CASC4-208ENST00000559151 AIM2O14862 343 aa7.47□□□□□ -1.21
CASC4-208ENST00000559151 CACNG3O60359 315 aa7.47□□□□□ -1.21
CASC4-208ENST00000559151 EEDO75530 441 aaKnown RBP7.47□□□□□ -1.21
CASC4-208ENST00000559151 FGF4P08620 206 aa7.47□□□□□ -1.21
CASC4-208ENST00000559151 RCC1P18754 421 aaPredicted RBP7.47□□□□□ -1.21
CASC4-208ENST00000559151 SGCAQ16586 387 aa7.47□□□□□ -1.21
CASC4-208ENST00000559151 C1orf185Q5T7R7 199 aa7.47□□□□□ -1.21
CASC4-208ENST00000559151 FRMPD2BQ6IN97 320 aa7.47□□□□□ -1.21
CASC4-208ENST00000559151 ANKRD26P1Q6NSI1 321 aa7.47□□□□□ -1.21
CASC4-208ENST00000559151 SLC7A13Q8TCU3 470 aa7.47□□□□□ -1.21
CASC4-208ENST00000559151 GEMIN7Q9H840 131 aaKnown RBP7.47□□□□□ -1.21
CASC4-208ENST00000559151 RPS6KB2Q9UBS0 482 aa7.47□□□□□ -1.21
CASC4-208ENST00000559151 GNPTGQ9UJJ9 305 aa7.47□□□□□ -1.21
CASC4-208ENST00000559151 HEBP2Q9Y5Z4 205 aa7.47□□□□□ -1.21
CASC4-208ENST00000559151 A8MU10 97 aa7.46□□□□□ -1.22
CASC4-208ENST00000559151 DNAH10OSP0CZ25 163 aa7.46□□□□□ -1.22
CASC4-208ENST00000559151 ANXA8P13928 327 aa7.46□□□□□ -1.22
CASC4-208ENST00000559151 FOLR1P15328 257 aa7.46□□□□□ -1.22
CASC4-208ENST00000559151 CRISP2P16562 243 aa7.46□□□□□ -1.22
CASC4-208ENST00000559151 RRM2P31350 389 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms