RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 RTTNQ86VV8 2226 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 VSTM5A8MXK1 200 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 NDUFS8O00217 210 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 SHOX2O60902 331 aaPredicted RBP13.05□□□□□ -0.32
SMAD6-203ENST00000558937 NPPAP01160 153 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 VIMP08670 466 aaKnown RBP13.05□□□□□ -0.32
SMAD6-203ENST00000558937 IGHV4-31P0DP07 118 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 ZNF14P17017 642 aaPredicted RBP13.05□□□□□ -0.32
SMAD6-203ENST00000558937 NR4A2P43354 598 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 GIPRP48546 466 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 PTDSS1P48651 473 aaKnown RBP13.05□□□□□ -0.32
SMAD6-203ENST00000558937 UGT2B15P54855 530 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 GGTLC2Q14390 218 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 NKAIN4Q8IVV8 208 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 ZNF583Q96ND8 569 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 DOK1Q99704 481 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 RAB1BQ9H0U4 201 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 FBXO9Q9UK97 447 aaPredicted RBP13.05□□□□□ -0.32
SMAD6-203ENST00000558937 CAPN7Q9Y6W3 813 aa13.05□□□□□ -0.32
SMAD6-203ENST00000558937 MALRD1Q5VYJ5 2156 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 LOC100653049A0A140TA62 436 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 LOC390937A0A1W2PQ73 354 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 TMEM129A0AVI4 362 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 FAM220BPB1ANY3 271 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 KRT34O76011 436 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 UBL3O95164 117 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 OR5F1O95221 314 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 RAB36O95755 333 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 HIST1H2ABP04908 130 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 NR4A1P22736 598 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 TAS2R41P59536 307 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 LSM11P83369 360 aaKnown RBP eCLIP13.04□□□□□ -0.32
SMAD6-203ENST00000558937 MSMPQ1L6U9 139 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 CYB5R2Q6BCY4 276 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 HIST3H2AQ7L7L0 130 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 SKA3Q8IX90 412 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 CDK20Q8IZL9 346 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 PCYOX1LQ8NBM8 494 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 PFN4Q8NHR9 129 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 TMEM255BQ8WV15 326 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 C10orf82Q8WW14 230 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 HIST1H2ACQ93077 130 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 ZNF566Q969W8 418 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 SLC25A44Q96H78 314 aaPredicted RBP13.04□□□□□ -0.32
SMAD6-203ENST00000558937 FOXN4Q96NZ1 517 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 DYNLRB1Q9NP97 96 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 ZNF446Q9NWS9 450 aa13.04□□□□□ -0.32
SMAD6-203ENST00000558937 IGHV4-61A0A0C4DH41 118 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 DHHO43323 396 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 OR7A10O76100 309 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 BCL10O95999 233 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 MT-ND1P03886 318 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 IGFBP1P08833 259 aaPredicted RBP13.03□□□□□ -0.32
SMAD6-203ENST00000558937 PATE4P0C8F1 98 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 PGA4P0DJD7 388 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 PGA3P0DJD8 388 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 ZNF35P13682 527 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 RBM34P42696 430 aaKnown RBP13.03□□□□□ -0.32
SMAD6-203ENST00000558937 OR1E2P47887 323 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 GZMKP49863 264 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 RAB1AP62820 205 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 GUCY1A3Q02108 690 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 RPL18Q07020 188 aaKnown RBP13.03□□□□□ -0.32
SMAD6-203ENST00000558937 PIN1Q13526 163 aaPredicted RBP13.03□□□□□ -0.32
SMAD6-203ENST00000558937 RAB39AQ14964 217 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 CHRFAM7AQ494W8 412 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 LRRC23Q53EV4 343 aaPredicted RBP13.03□□□□□ -0.32
SMAD6-203ENST00000558937 CYBRD1Q53TN4 286 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 LRFN4Q6PJG9 635 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 PIWIL3Q7Z3Z3 882 aaKnown RBP13.03□□□□□ -0.32
SMAD6-203ENST00000558937 ZCCHC24Q8N2G6 241 aaKnown RBP13.03□□□□□ -0.32
SMAD6-203ENST00000558937 SLC22A24Q8N4F4 322 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 FGFBP3Q8TAT2 258 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 MRPL24Q96A35 216 aaKnown RBP13.03□□□□□ -0.32
SMAD6-203ENST00000558937 SGTBQ96EQ0 304 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 BPESC1Q9GZL8 116 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 POLR2J2Q9GZM3 115 aaKnown RBP13.03□□□□□ -0.32
SMAD6-203ENST00000558937 POLR2J3Q9H1A7 115 aaKnown RBP13.03□□□□□ -0.32
SMAD6-203ENST00000558937 DENND2DQ9H6A0 471 aaPredicted RBP13.03□□□□□ -0.32
SMAD6-203ENST00000558937 TMEM38BQ9NVV0 291 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 GID8Q9NWU2 228 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 RIMS3Q9UJD0 308 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 CMAHPQ9Y471 501 aa13.03□□□□□ -0.32
SMAD6-203ENST00000558937 SH3PXD2BA1X283 911 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 BLOC1S5-TXNDC5H3BN57 136 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 STAMBPO95630 424 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 IFNA14P01570 189 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 IGHG1P01857 330 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 APEHP13798 732 aaKnown RBP13.02□□□□□ -0.33
SMAD6-203ENST00000558937 FUT1P19526 365 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 RUNX1T1Q06455 604 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 ZNF584Q8IVC4 421 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 MICU2Q8IYU8 434 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 POU5F2Q8N7G0 328 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 NOXO1Q8NFA2 376 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 OR2T12Q8NG77 320 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 TMEM239Q8WW34 195 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 NEU4Q8WWR8 484 aaPredicted RBP13.02□□□□□ -0.33
SMAD6-203ENST00000558937 RCN3Q96D15 328 aa13.02□□□□□ -0.33
SMAD6-203ENST00000558937 KCNK17Q96T54 332 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms