RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 CTLA4P16410 223 aa9.59□□□□□ -0.87
CUX1-217ENST00000558836 ACY1Q03154 408 aa9.59□□□□□ -0.87
CUX1-217ENST00000558836 PMS2CLQ68D20 193 aa9.59□□□□□ -0.87
CUX1-217ENST00000558836 TRILQ7L0X0 811 aa9.59□□□□□ -0.87
CUX1-217ENST00000558836 MAMDC2Q7Z304 686 aaPredicted RBP9.59□□□□□ -0.87
CUX1-217ENST00000558836 NFAM1Q8NET5 270 aaPredicted RBP9.59□□□□□ -0.87
CUX1-217ENST00000558836 OR2T4Q8NH00 348 aa9.59□□□□□ -0.87
CUX1-217ENST00000558836 LGALS14Q8TCE9 139 aa9.59□□□□□ -0.87
CUX1-217ENST00000558836 TTYH2Q9BSA4 534 aa9.59□□□□□ -0.87
CUX1-217ENST00000558836 CRB3Q9BUF7 120 aa9.59□□□□□ -0.87
CUX1-217ENST00000558836 NEK6Q9HC98 313 aa9.59□□□□□ -0.87
CUX1-217ENST00000558836 RBFOX1Q9NWB1 397 aaKnown RBP9.59□□□□□ -0.87
CUX1-217ENST00000558836 ANKRD10Q9NXR5 420 aa9.59□□□□□ -0.87
CUX1-217ENST00000558836 SLCO1C1Q9NYB5 712 aa9.59□□□□□ -0.87
CUX1-217ENST00000558836 OR6C70A6NIJ9 312 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 ZNF593O00488 134 aaPredicted RBP9.58□□□□□ -0.88
CUX1-217ENST00000558836 SEC14L5O43304 696 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 ARL6IP5O75915 188 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 OR2J2O76002 312 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 WNT11O96014 354 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 SERPINA3P01011 423 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 ZNF28P17035 718 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 CD53P19397 219 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 NPR2P20594 1047 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 POLR2HP52434 150 aaKnown RBP9.58□□□□□ -0.88
CUX1-217ENST00000558836 DGCR2P98153 550 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 INSM1Q01101 510 aaPredicted RBP9.58□□□□□ -0.88
CUX1-217ENST00000558836 FMODQ06828 376 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 OR7A5Q15622 319 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 ISXQ2M1V0 245 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 ZNF684Q5T5D7 378 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 FAM69AQ5T7M9 428 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 METAP1DQ6UB28 335 aaPredicted RBP9.58□□□□□ -0.88
CUX1-217ENST00000558836 NSMAFQ92636 917 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 MAP6Q96JE9 813 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 ST6GAL2Q96JF0 529 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 WDR77Q9BQA1 342 aaPredicted RBP9.58□□□□□ -0.88
CUX1-217ENST00000558836 DUSP23Q9BVJ7 150 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 GTPBP2Q9BX10 602 aaKnown RBP9.58□□□□□ -0.88
CUX1-217ENST00000558836 ABCG5Q9H222 651 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 KLRF1Q9NZS2 232 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 ZNF221Q9UK13 617 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 ZNF281Q9Y2X9 895 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 FRYQ5TBA9 3013 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 TECTAO75443 2155 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 LOC400499M0QZD8 3231 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 TTC28Q96AY4 2481 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 A0A1W2PQD3 144 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 NOTOA8MTQ0 251 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 A8MVM7 634 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 ZNF879B4DU55 563 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 MAS1P04201 325 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 SPARCP09486 303 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 DDOSTP39656 456 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 SLC25A1P53007 311 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 SNTA1Q13424 505 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 EEF1A1P5Q5VTE0 462 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 GRINAQ7Z429 371 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 FAM220AQ7Z4H9 259 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 PPP1R3BQ86XI6 285 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 CDC20BQ86Y33 519 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 DEFB123Q8N688 67 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 OR10G3Q8NGC4 313 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 EDAQ92838 391 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 RFT1Q96AA3 541 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 INTS14Q96SY0 518 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 KCNJ15Q99712 375 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 MED29Q9NX70 200 aa9.58□□□□□ -0.88
CUX1-217ENST00000558836 TRAV6A0A075B6T7 132 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 H0YC42 278 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 CCL4P13236 92 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 ALOX5APP20292 161 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 IL10RAQ13651 578 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 GPR176Q14439 515 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 SF3B4Q15427 424 aaKnown RBP eCLIP9.57□□□□□ -0.885e-6■■■■□ 20.8
CUX1-217ENST00000558836 CCDC157Q569K6 752 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 FCRLAQ7L513 359 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 RABEPKQ7Z6M1 372 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 OR5AK2Q8NH90 309 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 IFI44Q8TCB0 444 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 SPSB2Q99619 263 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 EMC6Q9BV81 110 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 TGIF2Q9GZN2 237 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 B9D1Q9UPM9 204 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 TRAV1-2A0A0B4J238 106 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 PRSS37A4D1T9 235 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 MEN1O00255 615 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 NPIPB7O75200 414 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 AHSA1O95433 338 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 TXNDC12O95881 172 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 APEHP13798 732 aaKnown RBP9.57□□□□□ -0.88
CUX1-217ENST00000558836 SQSTM1Q13501 440 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 CCDC58Q4VC31 144 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 SCAIQ8N9R8 606 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 CCNL2Q96S94 520 aaPredicted RBP9.57□□□□□ -0.88
CUX1-217ENST00000558836 AUNIPQ9H7T9 357 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 TEKT2Q9UIF3 430 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 MOKQ9UQ07 419 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 SLC22A13Q9Y226 551 aa9.57□□□□□ -0.88
CUX1-217ENST00000558836 ALG5Q9Y673 324 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms