RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 GPR35Q9HC97 309 aa7□□□□□ -1.29
TRAF3-205ENST00000558700 TMEM160Q9NX00 188 aa7□□□□□ -1.29
TRAF3-205ENST00000558700 SLAMF8Q9P0V8 285 aa7□□□□□ -1.29
TRAF3-205ENST00000558700 TMEFF2Q9UIK5 374 aaPredicted RBP7□□□□□ -1.29
TRAF3-205ENST00000558700 LEF1Q9UJU2 399 aaPredicted RBP7□□□□□ -1.29
TRAF3-205ENST00000558700 A0A087WUJ7 227 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 IGHV2OR16-5A0A0B4J2B6 119 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 VSTM5A8MXK1 200 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 HMGB1P1B2RPK0 211 aaPredicted RBP6.99□□□□□ -1.29
TRAF3-205ENST00000558700 M0R3G1 203 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 LCE2BO14633 110 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 CHP2O43745 196 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 GPRIN2O60269 458 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 TPST1O60507 370 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 FMO6PO60774 539 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 ENTPD5O75356 428 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 SEC14L2O76054 403 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 MT-ATP6P00846 226 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 BGLAPP02818 100 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 OR4A8P0C604 315 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 FAM157CP0CG43 387 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 CBR1P16152 277 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 NPR2P20594 1047 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 CBLP22681 906 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 PUDPQ08623 228 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 PMS2P3Q13401 168 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 OR1Q1Q15612 314 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 ADIPOQQ15848 244 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 CARTPTQ16568 116 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 GSG1Q2KHT4 349 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 TTMPQ5BVD1 217 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 CYB5R2Q6BCY4 276 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 ZNF613Q6PF04 617 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 C10orf111Q8N326 155 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 C10orf53Q8N6V4 93 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 IL17RDQ8NFM7 739 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 SPATA3Q8NHX4 192 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 WFDC12Q8WWY7 111 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 SLC41A3Q96GZ6 507 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 ANKRD27Q96NW4 1050 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 VRK1Q99986 396 aaPredicted RBP6.99□□□□□ -1.29
TRAF3-205ENST00000558700 SIKE1Q9BRV8 207 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 ULBP2Q9BZM5 246 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 RAB1BQ9H0U4 201 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 PLK3Q9H4B4 646 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 SEC61A2Q9H9S3 476 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 DYNLRB1Q9NP97 96 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 SLC52A3Q9NQ40 469 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 INTS9Q9NV88 658 aaKnown RBP6.99□□□□□ -1.29
TRAF3-205ENST00000558700 MRPL39Q9NYK5 338 aaKnown RBP6.99□□□□□ -1.29
TRAF3-205ENST00000558700 FBXL3Q9UKT7 428 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 KCNS2Q9ULS6 477 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 NOX1Q9Y5S8 564 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 ATRQ13535 2644 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 DNHD1Q96M86 4753 aa6.99□□□□□ -1.29
TRAF3-205ENST00000558700 YLPM1P49750 1951 aaKnown RBP6.99□□□□□ -1.29
TRAF3-205ENST00000558700 LOC390937A0A1W2PQ73 354 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 SHISA3A0PJX4 238 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 RNF212BA8MTL3 300 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 VWC2LB2RUY7 222 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 hCG_2039718K7EN88 272 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 M0R3H8 397 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 SERPINI2O75830 405 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 LY6HO94772 140 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 MFN2O95140 757 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 HPRP00739 348 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 OPN1SWP03999 348 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 CELA3BP08861 270 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 IGHV4-31P0DP07 118 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 APEHP13798 732 aaKnown RBP6.98□□□□□ -1.29
TRAF3-205ENST00000558700 HNF1AP20823 631 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 CALCRP30988 508 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 LSP1P33241 339 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 PCGF2P35227 344 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 NR4A2P43354 598 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 CSNK1A1P48729 337 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 RPS23P62266 143 aaKnown RBP6.98□□□□□ -1.29
TRAF3-205ENST00000558700 SNTB2Q13425 540 aaKnown RBP6.98□□□□□ -1.29
TRAF3-205ENST00000558700 NFYCQ13952 458 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 MST1LQ2TV78 715 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 GLIPR1L2Q4G1C9 344 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 INTS11Q5TA45 600 aaKnown RBP6.98□□□□□ -1.29
TRAF3-205ENST00000558700 CARD17Q5XLA6 110 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 FAM166AQ6J272 317 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 PGM2L1Q6PCE3 622 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 ZNF813Q6ZN06 617 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 PATL1Q86TB9 770 aaKnown RBP6.98□□□□□ -1.29
TRAF3-205ENST00000558700 MDP1Q86V88 176 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 MYPOPQ86VE0 399 aaPredicted RBP6.98□□□□□ -1.29
TRAF3-205ENST00000558700 C20orf196Q8IYI0 205 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 DPP10Q8N608 796 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 ANKS4BQ8N8V4 417 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 SMYD1Q8NB12 490 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 ZNF540Q8NDQ6 660 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 OR6N1Q8NGY5 312 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 TSPEARQ8WU66 669 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 LRR1Q96L50 414 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 CGREF1Q99674 301 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 MCHR1Q99705 422 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 ARHGDIGQ99819 225 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms