RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 ZNF808Q8N4W9 903 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ARHGAP9Q9BRR9 750 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 CNMDO75829 334 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 BMP1P13497 986 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 XCR1P46094 333 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 LBHQ53QV2 105 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 OR5M10Q6IEU7 315 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 FAHD1Q6P587 224 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MBOAT2Q6ZWT7 520 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 DPF1Q92782 380 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 RHNO1Q9BSD3 238 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PLEKHA3Q9HB20 300 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PADI1Q9ULC6 663 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 GRXCR2A6NFK2 248 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 NDUFS4O43181 175 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 FCMRO60667 390 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MSMO1Q15800 293 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 LAMTOR1Q6IAA8 161 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 C11orf87Q6NUJ2 197 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM151BQ8IW70 566 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 AUP1Q9Y679 476 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TRAV27A0A087WT01 109 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 NDUFB6O95139 128 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 IQCJQ1A5X6 159 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 DUSP28Q4G0W2 176 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 CBARPQ8N350 705 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PLK3Q9H4B4 646 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.41□□□□□ -1.861e-6■■■■□ 19.9
ATXN3-248ENST00000558190 GAGE10A6NGK3 116 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 HMSDA8MTL9 139 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TAS2R30P59541 319 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 HTRA3P83110 453 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MPPED2Q15777 294 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PTP4A1Q93096 173 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TOE1Q96GM8 510 aaKnown RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PCDHB10Q9UN67 800 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 GAB2Q9UQC2 676 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 EDC4Q6P2E9 1401 aaKnown RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 CXorf65A6NEN9 183 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 OR8G3PP0DMU2 310 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 VRK3Q8IV63 474 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MAML2Q8IZL2 1156 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 APCDD1Q8J025 514 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 OR1L3Q8NH93 324 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TOMM40LQ969M1 308 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM19Q96HH6 336 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 SIGMAR1Q99720 223 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ABI3Q9P2A4 366 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PCOLCE2Q9UKZ9 415 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 SHANK2Q9UPX8 1470 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 SUSD5O60279 629 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 AOAHP28039 575 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 P2RY4P51582 365 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 FKBP1CQ5VVH2 108 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 GLIPR1L1Q6UWM5 242 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 LGI3Q8N145 548 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 OR5V1Q9UGF6 321 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 WDR7Q9Y4E6 1490 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 SCDO00767 359 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PRNPP04156 253 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PGA4P0DJD7 388 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 PGA5P0DJD9 388 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 CALCBP10092 127 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TIA1P31483 386 aaKnown RBP eCLIP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 DCTDP32321 178 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 RPL7L1Q6DKI1 246 aaKnown RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 LDLRAD3Q86YD5 345 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ACOT4Q8N9L9 421 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 RGP1Q92546 391 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MED17Q9NVC6 651 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 SLC25A37Q9NYZ2 338 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MAGI1Q96QZ7 1491 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 HEPACAM2A8MVW5 462 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 RAB29O14966 203 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 HLA-AP01891 365 aaKnown RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 RAB28P51157 221 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 MEX3BQ6ZN04 569 aaKnown RBP3.41□□□□□ -1.86
ATXN3-248ENST00000558190 TAS1R3Q7RTX0 852 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 LIN7BQ9HAP6 207 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 NDUFB11Q9NX14 153 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ARL6IP1Q15041 203 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 OR4S1Q8NGB4 309 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 OR2T10Q8NGZ9 312 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 ORAI1Q96D31 301 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 EOMESO95936 686 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 PTGER1P34995 402 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 CTSCP53634 463 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 IL10RAQ13651 578 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 PRAMEF14Q5SWL7 426 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 IL34Q6ZMJ4 242 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 PPP1R3BQ86XI6 285 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 PELI3Q8N2H9 469 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM104Q8NE00 496 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 TSTD1Q8NFU3 115 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 G6PC3Q9BUM1 346 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 IL36AQ9UHA7 158 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 HSD17B6O14756 317 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 CPNE6O95741 557 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 CD3DP04234 171 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 CRABP1P29762 137 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms