RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 CKAP4Q07065 602 aaKnown RBP4.39□□□□□ -1.71
SPG11-208ENST00000558155 SRSF4Q08170 494 aaKnown RBP4.39□□□□□ -1.71
SPG11-208ENST00000558155 RBBP4Q09028 425 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 MFSD13AQ14CX5 517 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 SYPL1Q16563 259 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 TAF9Q16594 264 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 KLF17Q5JT82 389 aaPredicted RBP4.39□□□□□ -1.71
SPG11-208ENST00000558155 MRPL2Q5T653 305 aaKnown RBP4.39□□□□□ -1.71
SPG11-208ENST00000558155 CARD17Q5XLA6 110 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 ATG16L1Q676U5 607 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 ASPHD2Q6ICH7 369 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 H1FNTQ75WM6 255 aaPredicted RBP4.39□□□□□ -1.71
SPG11-208ENST00000558155 TRMT10CQ7L0Y3 403 aaKnown RBP4.39□□□□□ -1.71
SPG11-208ENST00000558155 ZNF771Q7L3S4 317 aaPredicted RBP4.39□□□□□ -1.71
SPG11-208ENST00000558155 ZNF627Q7L945 461 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 PIWIL3Q7Z3Z3 882 aaKnown RBP4.39□□□□□ -1.71
SPG11-208ENST00000558155 C1QL4Q86Z23 238 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 C10orf107Q8IVU9 208 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 UEVLDQ8IX04 471 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 CLECL1Q8IZS7 167 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 TMEM123Q8N131 208 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 SPICQ8N5J4 248 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 GOLGA6L1Q8N7Z2 621 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 ANKFN1Q8N957 763 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 OR8J2Q8NGG1 315 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 OR6N1Q8NGY5 312 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 WFDC12Q8WWY7 111 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 TAF15Q92804 592 aaKnown RBP eCLIP4.39□□□□□ -1.71
SPG11-208ENST00000558155 TUBGCP3Q96CW5 907 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 NEURL3Q96EH8 262 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 OR2M2Q96R28 347 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 DIRC2Q96SL1 478 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 BCL2L14Q9BZR8 327 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 SLC38A1Q9H2H9 487 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 RNF121Q9H920 327 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 CACYBPQ9HB71 228 aaKnown RBP4.39□□□□□ -1.71
SPG11-208ENST00000558155 CDH20Q9HBT6 801 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 MMP26Q9NRE1 261 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 PSMC3IPQ9P2W1 217 aaPredicted RBP4.39□□□□□ -1.71
SPG11-208ENST00000558155 SEC14L4Q9UDX3 406 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 MARCOQ9UEW3 520 aaPredicted RBP4.39□□□□□ -1.71
SPG11-208ENST00000558155 GIMAP2Q9UG22 337 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 TBK1Q9UHD2 729 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 POLR3KQ9Y2Y1 108 aaPredicted RBP4.39□□□□□ -1.71
SPG11-208ENST00000558155 INSIG2Q9Y5U4 225 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 GPR45Q9Y5Y3 372 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 PKD1L1Q8TDX9 2849 aa4.39□□□□□ -1.71
SPG11-208ENST00000558155 IQCMA0A1B0GVH7 501 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 PLSCR5A0PG75 271 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 PRAMEF27A3QJZ7 478 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 CDHR4A6H8M9 788 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 FTCDNL1E5RQL4 147 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 MS4A18H0YCH9 400 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 TRAPPC2LH3BP13 241 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 COPEO14579 308 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 SPRY3O43610 288 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 NPHS1O60500 1241 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 ERLIN1O75477 346 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 NDUFA7O95182 113 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 FARS2O95363 451 aaKnown RBP4.38□□□□□ -1.71
SPG11-208ENST00000558155 IGHV3-13P01766 116 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 OR8G3PP0DMU2 310 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 PPIAL4GP0DN37 164 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 B4GALT1P15291 398 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 SELEP16581 610 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 RPS4Y1P22090 263 aaKnown RBP4.38□□□□□ -1.71
SPG11-208ENST00000558155 CPT2P23786 658 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 ARRB2P32121 409 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 SLC6A9P48067 706 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 BPIFB3P59826 476 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 PLP2Q04941 152 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 PAX8Q06710 450 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 FUT5Q11128 374 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 LARS2Q15031 903 aaKnown RBP4.38□□□□□ -1.71
SPG11-208ENST00000558155 PDCD1Q15116 288 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 CHI3L2Q15782 390 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 TBC1D28Q2M2D7 210 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 SMU1Q2TAY7 513 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 MS4A18Q3C1V0 323 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 ZNF718Q3SXZ3 478 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 PDCD4Q53EL6 469 aaKnown RBP4.38□□□□□ -1.71
SPG11-208ENST00000558155 XKR7Q5GH72 579 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 NKAPLQ5M9Q1 402 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 PHYHD1Q5SRE7 291 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 FAM69AQ5T7M9 428 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 TMEM53Q6P2H8 277 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 C5orf46Q6UWT4 87 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 BTNL3Q6UXE8 466 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 LRRN1Q6UXK5 716 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 UNQ6126/PRO20091Q6UXV3 157 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 C9orf139Q6ZV77 190 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 RHOUQ7L0Q8 258 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 ZNF572Q7Z3I7 529 aaPredicted RBP4.38□□□□□ -1.71
SPG11-208ENST00000558155 REC114Q7Z4M0 266 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 DPPA2Q7Z7J5 298 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 ANKRD46Q86W74 232 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 RNF130Q86XS8 419 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 SKA3Q8IX90 412 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 KLHL36Q8N4N3 616 aa4.38□□□□□ -1.71
SPG11-208ENST00000558155 TRIML2Q8N7C3 387 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms