RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 POMGNT2Q8NAT1 580 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 SLC37A3Q8NCC5 494 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 OR5M9Q8NGP3 310 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 OR6N1Q8NGY5 312 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 OR4K13Q8NH42 304 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 MBD3L2Q8NHZ7 208 aaPredicted RBP11.04□□□□□ -0.64
TPM1-209ENST00000558072 FBLIM1Q8WUP2 373 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 IPCEF1Q8WWN9 437 aaPredicted RBP11.04□□□□□ -0.64
TPM1-209ENST00000558072 LINC00470Q9BZP3 86 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 CCNB1IP1Q9NPC3 277 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 PLCXD1Q9NUJ7 323 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 SEC14L4Q9UDX3 406 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 WARS2Q9UGM6 360 aaKnown RBP11.04□□□□□ -0.64
TPM1-209ENST00000558072 RNF6Q9Y252 685 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 ADAM18Q9Y3Q7 739 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 KIAA1549Q9HCM3 1950 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 BOD1L1Q8NFC6 3051 aa11.04□□□□□ -0.64
TPM1-209ENST00000558072 IGHV3-15A0A0B4J1V0 119 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 SLC35F4A4IF30 521 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 EFCAB10A6NFE3 127 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 MRPS14O60783 128 aaKnown RBP11.03□□□□□ -0.64
TPM1-209ENST00000558072 SS18L1O75177 396 aaPredicted RBP11.03□□□□□ -0.64
TPM1-209ENST00000558072 TRMUO75648 421 aaKnown RBP11.03□□□□□ -0.64
TPM1-209ENST00000558072 KRT33AO76009 404 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 TNFAIP8O95379 198 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 KLK2P20151 261 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 CSNK1A1P48729 337 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 GLO1Q04760 184 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 CD47Q08722 323 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 C6orf141Q5SZD1 244 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 MTFR2Q6P444 385 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 NHLRC1Q6VVB1 395 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 KDM8Q8N371 416 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 GPR137CQ8N3F9 429 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 NPEPL1Q8NDH3 523 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 NOXO1Q8NFA2 376 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 ABHD3Q8WU67 409 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 OTULINQ96BN8 352 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 MRPL48Q96GC5 212 aaKnown RBP11.03□□□□□ -0.64
TPM1-209ENST00000558072 IL4I1Q96RQ9 567 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 ENKD1Q9H0I2 346 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 RASSF1Q9NS23 344 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 HAO2Q9NYQ3 351 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 ZNF226Q9NYT6 803 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 GLTPQ9NZD2 209 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 CNOT2Q9NZN8 540 aaKnown RBP11.03□□□□□ -0.64
TPM1-209ENST00000558072 MYRFQ9Y2G1 1151 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 SPTA1P02549 2419 aa11.03□□□□□ -0.64
TPM1-209ENST00000558072 SLC22A23A1A5C7 686 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 HSPB2A8KAH6 182 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 ZNF814B7Z6K7 855 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 PRKYO43930 277 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 TMCC2O75069 709 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 KHDRBS3O75525 346 aaKnown RBP11.02□□□□□ -0.65
TPM1-209ENST00000558072 CLIC3O95833 236 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 GNAO1P09471 354 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 HLA-DOBP13765 273 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 HTR1FP30939 366 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 ATP6V1E1P36543 226 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 ZNF84P51523 738 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 CHN2P52757 468 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 CDH11P55287 796 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 RPS7P62081 194 aaKnown RBP11.02□□□□□ -0.65
TPM1-209ENST00000558072 CRMP1Q14194 572 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 HSPB2Q16082 182 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 MESTQ5EB52 335 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 AADACL4Q5VUY2 407 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 NIPAL3Q6P499 406 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 PLBD1Q6P4A8 553 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 NCCRP1Q6ZVX7 275 aaPredicted RBP11.02□□□□□ -0.65
TPM1-209ENST00000558072 MEPCEQ7L2J0 689 aaKnown RBP11.02□□□□□ -0.65
TPM1-209ENST00000558072 FAM214BQ7L5A3 538 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 ATCAYQ86WG3 371 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 CPOQ8IVL8 374 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 ZNF100Q8IYN0 542 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 SDR9C7Q8NEX9 313 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 OR6K3Q8NGY3 331 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 MYDGFQ969H8 173 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 APH1AQ96BI3 265 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 RASD2Q96D21 266 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 OR2M2Q96R28 347 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 KCNK17Q96T54 332 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 NMNAT3Q96T66 252 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 MNTQ99583 582 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 WACQ9BTA9 647 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 MRPL13Q9BYD1 178 aaKnown RBP11.02□□□□□ -0.65
TPM1-209ENST00000558072 RACGAP1Q9H0H5 632 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 MED29Q9NX70 200 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 UPB1Q9UBR1 384 aa11.02□□□□□ -0.65
TPM1-209ENST00000558072 EIF4E1BA6NMX2 242 aaKnown RBP11.01□□□□□ -0.65
TPM1-209ENST00000558072 E9PLN8 166 aa11.01□□□□□ -0.65
TPM1-209ENST00000558072 AQP8O94778 261 aa11.01□□□□□ -0.65
TPM1-209ENST00000558072 ZNF432O94892 652 aa11.01□□□□□ -0.65
TPM1-209ENST00000558072 GLCEO94923 617 aa11.01□□□□□ -0.65
TPM1-209ENST00000558072 FADS2O95864 444 aaKnown RBP11.01□□□□□ -0.65
TPM1-209ENST00000558072 IL18BPO95998 194 aa11.01□□□□□ -0.65
TPM1-209ENST00000558072 PGA4P0DJD7 388 aa11.01□□□□□ -0.65
TPM1-209ENST00000558072 PGA3P0DJD8 388 aa11.01□□□□□ -0.65
TPM1-209ENST00000558072 PIPP12273 146 aaPredicted RBP11.01□□□□□ -0.65
TPM1-209ENST00000558072 GABRB1P18505 474 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms