RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 MALRD1Q5VYJ5 2156 aa7.63□□□□□ -1.19
SNRPA1-206ENST00000558059 H7C417 338 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 RNF13O43567 381 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 SNX3O60493 162 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 OR7A10O76100 309 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 HLA-HP01893 362 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 CRYAAP02489 173 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 HIST1H2ABP04908 130 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 TSPAN19P0C672 248 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 THRBP10828 461 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 FUT1P19526 365 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 CSNK1A1P48729 337 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 GSK3BP49841 420 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 IDH3GP51553 393 aaPredicted RBP7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 HGFACQ04756 655 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 RPL18Q07020 188 aaKnown RBP7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 KRTAP1-1Q07627 177 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 SWI5Q1ZZU3 235 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 LRFN4Q6PJG9 635 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 ZNF813Q6ZN06 617 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 HIST3H2AQ7L7L0 130 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 MDP1Q86V88 176 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 CCDC36Q8IYA8 594 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 OR6N1Q8NGY5 312 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 TMEM239Q8WW34 195 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 LIPHQ8WWY8 451 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 HIST1H2ACQ93077 130 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 SGTBQ96EQ0 304 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 TPD52L3Q96J77 140 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 HS6ST2Q96MM7 605 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 ZNF75AQ96N20 296 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 ULBP2Q9BZM5 246 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 BARX1Q9HBU1 254 aaPredicted RBP7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 NOX3Q9HBY0 568 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 MOV10Q9HCE1 1003 aaKnown RBP7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 B3GAT2Q9NPZ5 323 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 CA10Q9NS85 328 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 C20orf141Q9NUB4 165 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 GLTPQ9NZD2 209 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 ZNF224Q9NZL3 707 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 POFUT2Q9Y2G5 429 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 SNX13Q9Y5W8 968 aa7.62□□□□□ -1.19
SNRPA1-206ENST00000558059 IGHV2OR16-5A0A0B4J2B6 119 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 BLOC1S5-TXNDC5H3BN57 136 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 CXCR6O00574 342 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 FFAR1O14842 300 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 SSX4O60224 188 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 PIP5K1CO60331 668 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 BCL10O95999 233 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 PGA4P0DJD7 388 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 PGA3P0DJD8 388 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 UMPSP11172 480 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 B4GALT1P15291 398 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 LSP1P33241 339 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 ARR3P36575 388 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 AQP2P41181 271 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 NUDT2P50583 147 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 PSME3P61289 254 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 CHRNB3Q05901 458 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 RUNX1T1Q06455 604 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 MELKQ14680 651 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 RAB35Q15286 201 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 KRTAP21-3Q3LHN1 58 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 CBLL1Q75N03 491 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 NANOGNBQ7Z5D8 188 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 TSEN54Q7Z6J9 526 aaKnown RBP7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 MAPK1IP1LQ8NDC0 245 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 OR10H5Q8NGA6 315 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 OR4F15Q8NGB8 312 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 MOSPD2Q8NHP6 518 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 LZICQ8WZA0 190 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 HTRA1Q92743 480 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 ZNF566Q969W8 418 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 FBXO17Q96EF6 278 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 SLC25A44Q96H78 314 aaPredicted RBP7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 PRRC1Q96M27 445 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 FOXB1Q99853 325 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 KCNS3Q9BQ31 491 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 MRPL13Q9BYD1 178 aaKnown RBP7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 REG4Q9BYZ8 158 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 FAM107BQ9H098 131 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 MAN2C1Q9NTJ4 1040 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 ABCD2Q9UBJ2 740 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 MED31Q9Y3C7 131 aa7.61□□□□□ -1.19
SNRPA1-206ENST00000558059 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.61□□□□□ -1.195e-18■■■■■ 67
SNRPA1-206ENST00000558059 IGHV4-30-2A0A087WSY4 118 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 A0A096LNT2 108 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 GMNCA6NCL1 334 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 J3KTA2 159 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 GSTA4O15217 222 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 DHHO43323 396 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 PDE5AO76074 875 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 PRSS23O95084 383 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 ZNF682O95780 498 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 SERPINA1P01009 418 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 IFNW1P05000 195 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 F13BP05160 661 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 QDPRP09417 244 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 OR4A8P0C604 315 aa7.6□□□□□ -1.19
SNRPA1-206ENST00000558059 PATE4P0C8F1 98 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms