RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 GPR4P46093 362 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 LSM11P83369 360 aaKnown RBP eCLIP12.05□□□□□ -0.48
SHMT2-234ENST00000557703 FOXD4Q12950 439 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-234ENST00000557703 ZSCAN26Q16670 478 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 RFX4Q33E94 735 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 C3orf36Q3SXR2 165 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 PGBD2Q6P3X8 592 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 RASSF6Q6ZTQ3 369 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 ADCK1Q86TW2 530 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 HIPK1Q86Z02 1210 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 ARIH2OSQ8N7S6 290 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 ASB10Q8WXI3 467 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 TMEM54Q969K7 222 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 MARVELD3Q96A59 401 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 TXNDC15Q96J42 360 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 WFIKKN1Q96NZ8 548 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 RBP7Q96R05 134 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 SNX18Q96RF0 628 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 GPR35Q9HC97 309 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 CRIM1Q9NZV1 1036 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 GRHPRQ9UBQ7 328 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 EDARQ9UNE0 448 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 BAIAP2Q9UQB8 552 aa12.05□□□□□ -0.48
SHMT2-234ENST00000557703 CELSR2Q9HCU4 2923 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 XKRYO14609 159 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 TXNDC12O95881 172 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 ITGA5P08648 1049 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 SDHAP31040 664 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 CCKARP32238 428 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 CLRN1P58418 232 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 ROR2Q01974 943 aaKnown RBP12.04□□□□□ -0.48
SHMT2-234ENST00000557703 CCNIQ14094 377 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 ATP6AP1Q15904 470 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 GABRA6Q16445 453 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 BEX5Q5H9J7 111 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 SHQ1Q6PI26 577 aaKnown RBP12.04□□□□□ -0.48
SHMT2-234ENST00000557703 KLHL24Q6TFL4 600 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 SVOPLQ8N434 492 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 OR10G2Q8NGC3 310 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 OR52L1Q8NGH7 329 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 OR13C2Q8NGS9 318 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 MOSPD2Q8NHP6 518 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 SLCO4A1Q96BD0 722 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 S100PBPQ96BU1 408 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 WACQ9BTA9 647 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 EMC6Q9BV81 110 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 POLDIP3Q9BY77 421 aaKnown RBP12.04□□□□□ -0.48
SHMT2-234ENST00000557703 ULBP2Q9BZM5 246 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 ZNF556Q9HAH1 456 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 CRLF2Q9HC73 371 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 ENOPH1Q9UHY7 261 aa12.04□□□□□ -0.48
SHMT2-234ENST00000557703 ARPC4-TTLL3A0A0A6YYG9 625 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 A6NNC1 897 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 UPK3AO75631 287 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 LYZL6O75951 148 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 GASTP01350 101 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 IGHV3-9P01782 118 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 NPR2P20594 1047 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 EDNRAP25101 427 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 GUCA1AP43080 201 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-234ENST00000557703 ZNF84P51523 738 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 CAMK2DQ13557 499 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 C10orf128Q5T292 105 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 KLHL17Q6TDP4 642 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 ZNF620Q6ZNG0 422 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 FAM122BQ7Z309 247 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 AQP11Q8NBQ7 271 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 NOXO1Q8NFA2 376 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 OR5K1Q8NHB7 308 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 LINC01560Q8TB33 94 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 ZNF519Q8TB69 540 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 CENPNQ96H22 339 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-234ENST00000557703 RADILQ96JH8 1075 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 KCNK17Q96T54 332 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 KATNB1Q9BVA0 655 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 OR52D1Q9H346 318 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 FBXL3Q9UKT7 428 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 ZNF346Q9UL40 294 aaKnown RBP12.03□□□□□ -0.48
SHMT2-234ENST00000557703 POFUT2Q9Y2G5 429 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 CDH10Q9Y6N8 788 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 U3KQV3 271 aa12.03□□□□□ -0.48
SHMT2-234ENST00000557703 DHHO43323 396 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 TRMUO75648 421 aaKnown RBP12.02□□□□□ -0.49
SHMT2-234ENST00000557703 SERPINI2O75830 405 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 FARS2O95363 451 aaKnown RBP12.02□□□□□ -0.49
SHMT2-234ENST00000557703 ACVR1BP36896 505 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 UBE2NP61088 152 aaKnown RBP12.02□□□□□ -0.49
SHMT2-234ENST00000557703 PPA1Q15181 289 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 CEACAM16Q2WEN9 425 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 ZDHHC13Q8IUH4 622 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 OR1K1Q8NGR3 316 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 FANK1Q8TC84 345 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 NANOS1Q8WY41 292 aaKnown RBP12.02□□□□□ -0.49
SHMT2-234ENST00000557703 BCL2L2Q92843 193 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-234ENST00000557703 ALKBH3Q96Q83 286 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-234ENST00000557703 FEVQ99581 238 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 GPA33Q99795 319 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 TEX12Q9BXU0 123 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 ESRP2Q9H6T0 727 aaKnown RBP12.02□□□□□ -0.49
SHMT2-234ENST00000557703 SLC17A5Q9NRA2 495 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms