RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 FAM122AQ96E09 287 aa11.46□□□□□ -0.58
SHMT2-229ENST00000557348 RNF31Q96EP0 1072 aa11.46□□□□□ -0.58
SHMT2-229ENST00000557348 MRGPRX4Q96LA9 322 aa11.46□□□□□ -0.58
SHMT2-229ENST00000557348 OR2M2Q96R28 347 aa11.46□□□□□ -0.58
SHMT2-229ENST00000557348 MNTQ99583 582 aa11.46□□□□□ -0.58
SHMT2-229ENST00000557348 KATNB1Q9BVA0 655 aa11.46□□□□□ -0.58
SHMT2-229ENST00000557348 ALG8Q9BVK2 526 aa11.46□□□□□ -0.58
SHMT2-229ENST00000557348 NMNAT2Q9BZQ4 307 aa11.46□□□□□ -0.58
SHMT2-229ENST00000557348 CLEC4MQ9H2X3 399 aaPredicted RBP11.46□□□□□ -0.58
SHMT2-229ENST00000557348 YARS2Q9Y2Z4 477 aaKnown RBP11.46□□□□□ -0.58
SHMT2-229ENST00000557348 STK17BO94768 372 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 RENP00797 406 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 RAF1P04049 648 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 UMODP07911 640 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 JMJD7P0C870 316 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 COX6A1P12074 109 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 DIO1P49895 249 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 ZNF41P51814 821 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-229ENST00000557348 CTXN1P60606 82 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 SLC25A53Q5H9E4 307 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 OR2G6Q5TZ20 316 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 C1orf140Q5VVS0 124 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 FAM205BPQ63HN1 556 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 PAQR6Q6TCH4 344 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 RAB11FIP2Q7L804 512 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 LHFPL3Q86UP9 236 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 SYS1Q8N2H4 156 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 LRRC75AQ8NAA5 344 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 NPEPL1Q8NDH3 523 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 SDR9C7Q8NEX9 313 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 OR5J2Q8NH18 312 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 OR4K13Q8NH42 304 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 GATAD2BQ8WXI9 593 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 C8orf44Q96CB5 159 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 DDIT4LQ96D03 193 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 KTI12Q96EK9 354 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-229ENST00000557348 IMMP1LQ96LU5 166 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 SORCS2Q96PQ0 1159 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 RTN4RQ9BZR6 473 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 B3GNT4Q9C0J1 378 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 ACTR6Q9GZN1 396 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 NARFLQ9H6Q4 476 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 ADGRL4Q9HBW9 690 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 SERINC1Q9NRX5 453 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 BABAM2Q9NXR7 383 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 GRHPRQ9UBQ7 328 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 WIF1Q9Y5W5 379 aa11.45□□□□□ -0.58
SHMT2-229ENST00000557348 MUC6Q6W4X9 2439 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 CCDC187A0A096LP49 1063 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 NSG1A0A0A6YYJ2 146 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 NPIPB13A6NJU9 1138 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 A8MV72 311 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-229ENST00000557348 NPIPB4C9JG80 1138 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 AGRPO00253 132 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 OR2J2O76002 312 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 GLCEO94923 617 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 OR6A2O95222 327 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 ANXA3P12429 323 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 PLA2G5P39877 138 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 AQP2P41181 271 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 BLVRAP53004 296 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 RPL18Q07020 188 aaKnown RBP11.44□□□□□ -0.58
SHMT2-229ENST00000557348 FAM69BQ5VUD6 431 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 CDCP2Q5VXM1 449 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 LYPD8Q6UX82 237 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 FAM122BQ7Z309 247 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 PM20D2Q8IYS1 436 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 ARMC10Q8N2F6 343 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 ZNF248Q8NDW4 579 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 ZNF680Q8NEM1 530 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 ATP6V1C2Q8NEY4 427 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 OR10H4Q8NGA5 316 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 OR4M1Q8NGD0 313 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 OR8H1Q8NGG4 311 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 OR2T4Q8NH00 348 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 THAP3Q8WTV1 239 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-229ENST00000557348 SMPDL3BQ92485 455 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 TAAR8Q969N4 342 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 MOGAT1Q96PD6 335 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 RASL10BQ96S79 203 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 ZNF649Q9BS31 505 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 EDEM2Q9BV94 578 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 PTGES2Q9H7Z7 377 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 MED20Q9H944 212 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 KIF25Q9UIL4 384 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 B3GALT1Q9Y5Z6 326 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 HS3ST3B1Q9Y662 390 aa11.44□□□□□ -0.58
SHMT2-229ENST00000557348 A0A087WZY1 265 aa11.43□□□□□ -0.58
SHMT2-229ENST00000557348 XKRYO14609 159 aa11.43□□□□□ -0.58
SHMT2-229ENST00000557348 CDX4O14627 284 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-229ENST00000557348 LRP3O75074 770 aa11.43□□□□□ -0.58
SHMT2-229ENST00000557348 APOL3O95236 402 aa11.43□□□□□ -0.58
SHMT2-229ENST00000557348 IGHMP01871 453 aa11.43□□□□□ -0.58
SHMT2-229ENST00000557348 SPI1P17947 270 aa11.43□□□□□ -0.58
SHMT2-229ENST00000557348 ADH6P28332 368 aa11.43□□□□□ -0.58
SHMT2-229ENST00000557348 SLC6A1P30531 599 aa11.43□□□□□ -0.58
SHMT2-229ENST00000557348 EIF1P41567 113 aaKnown RBP11.43□□□□□ -0.58
SHMT2-229ENST00000557348 ERVK-25P63136 954 aa11.43□□□□□ -0.58
SHMT2-229ENST00000557348 HNRNPA0Q13151 305 aaKnown RBP11.43□□□□□ -0.58
SHMT2-229ENST00000557348 SSPNQ14714 243 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms