RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 ZDHHC21Q8IVQ6 265 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 FAM169BQ8N8A8 192 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 MOSPD2Q8NHP6 518 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 ASB10Q8WXI3 467 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 NANOS1Q8WY41 292 aaKnown RBP10.92□□□□□ -0.66
SLIRP-209ENST00000557342 FBXW5Q969U6 566 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 ASB9Q96DX5 294 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 LRGUKQ96M69 825 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 ALPK1Q96QP1 1244 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 CCL19Q99731 98 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 FOXB1Q99853 325 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 THTPAQ9BU02 230 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 C1QTNF6Q9BXI9 259 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 TRIM15Q9C019 465 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 TXNIPQ9H3M7 391 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 MAGIXQ9H6Y5 334 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 AURKCQ9UQB9 309 aa10.92□□□□□ -0.66
SLIRP-209ENST00000557342 CSMD2Q7Z408 3487 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 TRAV27A0A087WT01 109 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 TRMUO75648 421 aaKnown RBP10.91□□□□□ -0.66
SLIRP-209ENST00000557342 KRT36O76013 467 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 IGHMP01871 453 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 IFNGR2P38484 337 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 GPR4P46093 362 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 CTXN1P60606 82 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 TRAP1Q12931 704 aaKnown RBP10.91□□□□□ -0.66
SLIRP-209ENST00000557342 ZSCAN26Q16670 478 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 ZBED5Q49AG3 693 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 FAM98BQ52LJ0 330 aaKnown RBP10.91□□□□□ -0.66
SLIRP-209ENST00000557342 FAM205BPQ63HN1 556 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 SLC22A25Q6T423 547 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 ZNF813Q6ZN06 617 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 WDFY1Q8IWB7 410 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 NOXO1Q8NFA2 376 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 KBTBD8Q8NFY9 601 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 OR4K5Q8NGD3 323 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 OR13C2Q8NGS9 318 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 OR52J3Q8NH60 311 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 OR51A7Q8NH64 312 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 LILRB1Q8NHL6 650 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-209ENST00000557342 FNDC8Q8TC99 324 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 ZNF837Q96EG3 531 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-209ENST00000557342 FAM46AQ96IP4 442 aaKnown RBP10.91□□□□□ -0.66
SLIRP-209ENST00000557342 SLC38A2Q96QD8 506 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 TNFRSF13CQ96RJ3 184 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 SEPHS2Q99611 448 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 KCNS3Q9BQ31 491 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 BTBD10Q9BSF8 475 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 MRPL13Q9BYD1 178 aaKnown RBP10.91□□□□□ -0.66
SLIRP-209ENST00000557342 CXXC4Q9H2H0 198 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 NELFAQ9H3P2 528 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 CISD1Q9NZ45 108 aaKnown RBP10.91□□□□□ -0.66
SLIRP-209ENST00000557342 CRNNQ9UBG3 495 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-209ENST00000557342 POU2F3Q9UKI9 436 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 TMCC3Q9ULS5 477 aa10.91□□□□□ -0.66
SLIRP-209ENST00000557342 HRNRQ86YZ3 2850 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-209ENST00000557342 CREBBPQ92793 2442 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 TRBV4-1A0A0J9YWV2 114 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 TCRBV5S2A0A599 114 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 SH3PXD2BA1X283 911 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 A6NIZ1 184 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 SHISA9B4DS77 424 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 DHHO43323 396 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 MGRN1O60291 552 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 SMPD2O60906 423 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 ATP5HO75947 161 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 QDPRP09417 244 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 CBR1P16152 277 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 HOXB6P17509 224 aaKnown RBP10.9□□□□□ -0.66
SLIRP-209ENST00000557342 RRM2P31350 389 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 ARR3P36575 388 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 RPL4P36578 427 aaKnown RBP10.9□□□□□ -0.66
SLIRP-209ENST00000557342 CAPZA2P47755 286 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 OMPP47874 163 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 RASSF2P50749 326 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 ZNF84P51523 738 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 CDH11P55287 796 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 RAP1BP61224 184 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 RPL27P61353 136 aaKnown RBP10.9□□□□□ -0.66
SLIRP-209ENST00000557342 RAP1AP62834 184 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 MS4A2Q01362 244 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 CHRNB3Q05901 458 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 TESK1Q15569 626 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 HIST3H3Q16695 136 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 ARMC4Q5T2S8 1044 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 SPNS3Q6ZMD2 512 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 YTHDF3Q7Z739 585 aaKnown RBP10.9□□□□□ -0.66
SLIRP-209ENST00000557342 MEX3DQ86XN8 651 aaKnown RBP10.9□□□□□ -0.66
SLIRP-209ENST00000557342 LRRC75A-AS1Q8N1F1 130 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 LRRC75AQ8NAA5 344 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 TMEM171Q8WVE6 324 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 MCHR2Q969V1 340 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 CCDC124Q96CT7 223 aaKnown RBP10.9□□□□□ -0.66
SLIRP-209ENST00000557342 FUZQ9BT04 418 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 ALG12Q9BV10 488 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 CXorf56Q9H5V9 222 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 DENND2DQ9H6A0 471 aaPredicted RBP10.9□□□□□ -0.66
SLIRP-209ENST00000557342 FAIMQ9NVQ4 179 aa10.9□□□□□ -0.66
SLIRP-209ENST00000557342 ZNF346Q9UL40 294 aaKnown RBP10.9□□□□□ -0.66
SLIRP-209ENST00000557342 AKAP6Q13023 2319 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms