RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 CRLF2Q9HC73 371 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 DUSP22Q9NRW4 184 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 TMEM181Q9P2C4 612 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 SEC14L4Q9UDX3 406 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 CHMP2BQ9UQN3 213 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 DTNAQ9Y4J8 743 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 INSIG2Q9Y5U4 225 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 POMT1Q9Y6A1 747 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 DSPPQ9NZW4 1301 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 SACSQ9NZJ4 4579 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 IGHV1-69-2A0A0G2JMI3 117 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 C17orf100A8MU93 164 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 CLDN25C9JDP6 229 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF587BE7ETH6 402 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 NPIPB9F8W1W9 429 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 TP73O15350 636 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 PCDH7O60245 1069 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 PIAS1O75925 651 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 LGI1O95970 557 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 OTCP00480 354 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 IGHMP01871 453 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 ALOX5P09917 674 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 TFPIP10646 304 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 CPT2P23786 658 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 NTSP30990 170 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 CD80P33681 288 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 SPRP35270 261 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-223ENST00000557076 ARL1P40616 181 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-223ENST00000557076 FNTAP49354 379 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 MAP2K6P52564 334 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 PRKAG1P54619 331 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 ARL4CP56559 192 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 OR2B6P58173 313 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 SELENOVP59797 346 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 POU6F2P78424 691 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-223ENST00000557076 CCL8P80075 99 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 SLC3A1Q07837 685 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 ACSM2AQ08AH3 577 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 LCP2Q13094 533 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 TRAF3Q13114 568 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 HFEQ30201 348 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 DEFB112Q30KQ8 113 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 PGS1Q32NB8 556 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 GLIPR1L2Q4G1C9 344 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 SPIN4Q56A73 249 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.94□□□□□ -1.78
SCFD1-223ENST00000557076 GRTP1Q5TC63 336 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 PRAMEF8Q5VWM4 474 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 PRAMEF7Q5VXH5 474 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 ACSM2BQ68CK6 577 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 FAM71E1Q6IPT2 247 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 KRT80Q6KB66 452 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 PAQR6Q6TCH4 344 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 RAPH1Q70E73 1250 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 LRP11Q86VZ4 500 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 FAM156AQ8NDB6 213 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 OR4F6Q8NGB9 312 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 ST7LQ8TDW4 575 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 ADAMTS15Q8TE58 950 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 GRK7Q8WTQ7 553 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 UPRTQ96BW1 309 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 C16orf58Q96GQ5 468 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 GPR78Q96P69 363 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 STACQ99469 402 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 GAL3ST1Q99999 423 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 THUMPD3Q9BV44 507 aaKnown RBP3.94□□□□□ -1.78
SCFD1-223ENST00000557076 LINC00470Q9BZP3 86 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 CHIAQ9BZP6 476 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 DENND2DQ9H6A0 471 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-223ENST00000557076 EQTNQ9NQ60 294 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 HINT3Q9NQE9 182 aaKnown RBP3.94□□□□□ -1.78
SCFD1-223ENST00000557076 SLC6A13Q9NSD5 602 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 B3GNT2Q9NY97 397 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 TXNDC16Q9P2K2 825 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 CHRNA9Q9UGM1 479 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 IL20RAQ9UHF4 553 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 GUCA1BQ9UMX6 200 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 SOX21Q9Y651 276 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-223ENST00000557076 SPIN1Q9Y657 262 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-223ENST00000557076 DNAH9Q9NYC9 4486 aa3.94□□□□□ -1.78
SCFD1-223ENST00000557076 STAB2Q8WWQ8 2551 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 SLC22A23A1A5C7 686 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 E7ESA3 106 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 STX16-NPEPL1H3BU86 382 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 MANBAO00462 879 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 PPP6CO00743 305 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 STX16O14662 325 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 TPD52L2O43399 206 aaKnown RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 KLHL2O95198 593 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 KRT6AP02538 564 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 KRT6BP04259 564 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 C2P06681 752 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 ANXA4P09525 319 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-223ENST00000557076 IGHV4-38-2P0DP08 117 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 ACP2P11117 423 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF250P15622 560 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 CHN1P15882 459 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 ATP6V1C1P21283 382 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 DRD4P21917 467 aa3.93□□□□□ -1.78
SCFD1-223ENST00000557076 MAGEB1P43366 347 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms