RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ZNF275Q9NSD4 429 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-210ENST00000556718 HOXC10Q9NYD6 342 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 CSDC2Q9Y534 153 aaKnown RBP3.24□□□□□ -1.89
PRPF39-210ENST00000556718 FADS3Q9Y5Q0 445 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 KIAA0232Q92628 1395 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 ITSN2Q9NZM3 1697 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 PZPP20742 1482 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 PLA2R1Q13018 1463 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 IGHV1OR21-1A0A087WYE8 117 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 H0YIV9 168 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 DNALI1O14645 258 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-210ENST00000556718 KDM6AO15550 1401 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-210ENST00000556718 CACNG3O60359 315 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 DFNA5O60443 496 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 SUPT3HO75486 399 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 OR7A10O76100 309 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 SNAPINO95295 136 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 LCA5LO95447 670 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 GAPDHP04406 335 aaKnown RBP3.23□□□□□ -1.89
PRPF39-210ENST00000556718 ASGR1P07306 291 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 TCP1P17987 556 aaKnown RBP3.23□□□□□ -1.89
PRPF39-210ENST00000556718 TBPP20226 339 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 PSMB1P20618 241 aaKnown RBP3.23□□□□□ -1.89
PRPF39-210ENST00000556718 CMA1P23946 247 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 FASP25445 335 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 NOS1P29475 1434 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 HNRNPH3P31942 346 aaKnown RBP3.23□□□□□ -1.89
PRPF39-210ENST00000556718 FDFT1P37268 417 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 VHLP40337 213 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 GLP1RP43220 463 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 YAP1P46937 504 aaKnown RBP3.23□□□□□ -1.89
PRPF39-210ENST00000556718 SELENOTP62341 195 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 RPS15P62841 145 aaKnown RBP3.23□□□□□ -1.89
PRPF39-210ENST00000556718 ERVK-25P63136 954 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 SPAG1Q07617 926 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 ARFRP1Q13795 201 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 KLF17Q5JT82 389 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-210ENST00000556718 CCDC122Q5T0U0 273 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 C1orf146Q5VVC0 180 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 EIF3MQ7L2H7 374 aaKnown RBP3.23□□□□□ -1.89
PRPF39-210ENST00000556718 LUZP2Q86TE4 346 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 SLC26A11Q86WA9 606 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 SLC35F6Q8N357 371 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 TMEM252Q8N6L7 170 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 OR7G2Q8NG99 324 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 OR10H4Q8NGA5 316 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 OR2AP1Q8NGE2 309 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 TYMSOSQ8TAI1 123 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 FAM110BQ8TC76 370 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 ELMO1Q92556 727 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 VSIG2Q96IQ7 327 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 HSFY1Q96LI6 401 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 OXGR1Q96P68 337 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 TECTBQ96PL2 329 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 ZNF184Q99676 751 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-210ENST00000556718 EBF4Q9BQW3 602 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 C11orf70Q9BRQ4 267 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 RNF126Q9BV68 326 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 TIPINQ9BVW5 301 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 ZNF160Q9HCG1 818 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 MRPL47Q9HD33 250 aaKnown RBP3.23□□□□□ -1.89
PRPF39-210ENST00000556718 GIN1Q9NXP7 522 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 CD274Q9NZQ7 290 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 B4GALT7Q9UBV7 327 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 KIAA1257Q9ULG3 409 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 PRELID1Q9Y255 219 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 LAMC3Q9Y6N6 1575 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 ARHGEF11O15085 1522 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 GON4LQ3T8J9 2241 aa3.23□□□□□ -1.89
PRPF39-210ENST00000556718 MED14O60244 1454 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 FANCD2Q9BXW9 1451 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 WDR7Q9Y4E6 1490 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 ABCC5O15440 1437 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 IGHV3OR16-13A0A075B7E8 117 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 A0A1W2PPV9 198 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 H0YC42 278 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 GOLGA8TH3BQL2 631 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 GFYI3L273 518 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 K7N7A8 449 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 TNFSF11O14788 317 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 NVLO15381 856 aaKnown RBP3.22□□□□□ -1.89
PRPF39-210ENST00000556718 BCL2L11O43521 198 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 FGF1P05230 155 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 C2P06681 752 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 PAEPP09466 180 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 GOLGA8HP0CJ92 632 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 AQP1P29972 269 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 RRM2P31350 389 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 OTX1P32242 354 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-210ENST00000556718 PHBP35232 272 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 BTDP43251 543 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 KIR2DS4P43632 304 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 ARRB1P49407 418 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-210ENST00000556718 TNNC1P63316 161 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 CSNK1G2P78368 415 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 ZNF45Q02386 682 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 MERTKQ12866 999 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 ARHGAP19Q14CB8 494 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 SPA17Q15506 151 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 CCDC14Q49A88 953 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms