RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 THUMPD1Q9NXG2 353 aaKnown RBP10.82□□□□□ -0.68
SHMT2-223ENST00000556689 ZNF224Q9NZL3 707 aa10.82□□□□□ -0.68
SHMT2-223ENST00000556689 SLC7A8Q9UHI5 535 aa10.82□□□□□ -0.68
SHMT2-223ENST00000556689 SLC22A23A1A5C7 686 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 C17orf100A8MU93 164 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 SNNO75324 88 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-223ENST00000556689 UBL3O95164 117 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 ANP32DO95626 131 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 SERPINA5P05154 406 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 IL6P05231 212 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 ALDOCP09972 364 aaKnown RBP10.81□□□□□ -0.68
SHMT2-223ENST00000556689 HKR1P10072 659 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 B4GALT1P15291 398 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 ADRA2CP18825 462 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 GATA3P23771 443 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 CRYBB2P43320 205 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 RAD52P43351 418 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 GYS2P54840 703 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 UBA52P62987 128 aaKnown RBP10.81□□□□□ -0.68
SHMT2-223ENST00000556689 CCL8P80075 99 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 CAMK2DQ13557 499 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 PCGF3Q3KNV8 242 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 PDCD4Q53EL6 469 aaKnown RBP10.81□□□□□ -0.68
SHMT2-223ENST00000556689 AVPI1Q5T686 147 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 DCAF12L2Q5VW00 463 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 RGS7BPQ6MZT1 257 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-223ENST00000556689 TREML1Q86YW5 311 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 LSMEM1Q8N8F7 131 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 GLB1L3Q8NCI6 653 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-223ENST00000556689 OR6N1Q8NGY5 312 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 TMEM19Q96HH6 336 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 TXNDC15Q96J42 360 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 SORT1Q99523 831 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 FOXB1Q99853 325 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 ULBP2Q9BZM5 246 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 FAM107BQ9H098 131 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 TPT1P8Q9HAU6 139 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 SLC6A13Q9NSD5 602 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 CORINQ9Y5Q5 1042 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 GPR45Q9Y5Y3 372 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 MGAM2Q2M2H8 2515 aa10.81□□□□□ -0.68
SHMT2-223ENST00000556689 A0A087WUJ7 227 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 GMNCA6NCL1 334 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 EDF1O60869 148 aaKnown RBP10.8□□□□□ -0.68
SHMT2-223ENST00000556689 DEAF1O75398 565 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-223ENST00000556689 CLPTM1O96005 669 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 HPRP00739 348 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 PATE4P0C8F1 98 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 ZCCHC18P0CG32 403 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 DEFA6Q01524 100 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 ALG10BQ5I7T1 473 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 NHLRC1Q6VVB1 395 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 RBMS3Q6XE24 437 aaKnown RBP10.8□□□□□ -0.68
SHMT2-223ENST00000556689 PIWIL3Q7Z3Z3 882 aaKnown RBP10.8□□□□□ -0.68
SHMT2-223ENST00000556689 SKA3Q8IX90 412 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 MIER2Q8N344 545 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 OR6S1Q8NH40 331 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 SYNPRQ8TBG9 265 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 RNF217Q8TC41 542 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 SNX33Q8WV41 574 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 DNAJA4Q8WW22 397 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-223ENST00000556689 C11orf40Q8WZ69 217 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 SLC41A3Q96GZ6 507 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 ASPNQ9BXN1 380 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 C7orf69Q9H7B7 122 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 FGFR1OP2Q9NVK5 253 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 PNPOQ9NVS9 261 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 MED29Q9NX70 200 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 SLCO1C1Q9NYB5 712 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 NKIRAS2Q9NYR9 191 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 KLHL14Q9P2G3 628 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 HAO1Q9UJM8 370 aa10.8□□□□□ -0.68
SHMT2-223ENST00000556689 IGKV1D-42A0A075B6H8 117 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 IGHV1-69-2A0A0G2JMI3 117 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 A0A1B0GWA3 101 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 TPD52L2O43399 206 aaKnown RBP10.79□□□□□ -0.68
SHMT2-223ENST00000556689 PRSS23O95084 383 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 IGHV2-5P01817 119 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 FAM157BP0CG42 384 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 KITP10721 976 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 ZNF250P15622 560 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 KLF3P57682 345 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-223ENST00000556689 ZP4Q12836 540 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 PMS2P3Q13401 168 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 MOGQ16653 247 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 ULK3Q6PHR2 472 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 PXKQ7Z7A4 578 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 ZNF584Q8IVC4 421 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 SCAIQ8N9R8 606 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 FGFBP3Q8TAT2 258 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 C22orf15Q8WYQ4 148 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 RAB1CQ92928 201 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 SLC47A1Q96FL8 570 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 TIMD4Q96H15 378 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 EPYCQ99645 322 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 BCL2L10Q9HD36 194 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 DECR2Q9NUI1 292 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 MRGBPQ9NV56 204 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 SELENONQ9NZV5 590 aa10.79□□□□□ -0.68
SHMT2-223ENST00000556689 OPN4Q9UHM6 478 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms