RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 ALOX5APP20292 161 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 PTBP1P26599 531 aaKnown RBP eCLIP9.12□□□□□ -0.95
TMEM260-211ENST00000556648 RBMS1P29558 406 aaKnown RBP9.12□□□□□ -0.95
TMEM260-211ENST00000556648 ALKBH1Q13686 389 aaKnown RBP9.12□□□□□ -0.95
TMEM260-211ENST00000556648 OR7A5Q15622 319 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 ATAD3CQ5T2N8 411 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 RSBN1Q5VWQ0 802 aaPredicted RBP9.12□□□□□ -0.95
TMEM260-211ENST00000556648 ZNF57Q68EA5 555 aaPredicted RBP9.12□□□□□ -0.95
TMEM260-211ENST00000556648 TMEM205Q6UW68 189 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 PAMR1Q6UXH9 720 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 SLC35D2Q76EJ3 337 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 FAM220AQ7Z4H9 259 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 PRSS35Q8N3Z0 413 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 OR51A4Q8NGJ6 313 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 OR5M1Q8NGP8 315 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 STK35Q8TDR2 534 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 RNF138Q8WVD3 245 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 NAT6Q93015 286 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 MRPL48Q96GC5 212 aaKnown RBP9.12□□□□□ -0.95
TMEM260-211ENST00000556648 GFM1Q96RP9 751 aaKnown RBP9.12□□□□□ -0.95
TMEM260-211ENST00000556648 GTPBP2Q9BX10 602 aaKnown RBP9.12□□□□□ -0.95
TMEM260-211ENST00000556648 ULBP3Q9BZM4 244 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 TXNIPQ9H3M7 391 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 RNF121Q9H920 327 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 NLKQ9UBE8 527 aa9.12□□□□□ -0.95
TMEM260-211ENST00000556648 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 D6RAR5 112 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 MS4A18H0YCH9 400 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 EEF1E1O43324 174 aaKnown RBP9.11□□□□□ -0.95
TMEM260-211ENST00000556648 GPRIN2O60269 458 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 ARL6IP5O75915 188 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 ONECUT2O95948 504 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 IGHMP01871 453 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 HLA-DQA2P01906 255 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 OPN1LWP04000 364 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 KRT8P05787 483 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 IMPDH2P12268 514 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 SDHBP21912 280 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 DDOSTP39656 456 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 KIR3DL2P43630 455 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 PITPNBP48739 271 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 SRP9P49458 86 aaKnown RBP9.11□□□□□ -0.95
TMEM260-211ENST00000556648 CLDN12P56749 244 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 FMODQ06828 376 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 KCNJ8Q15842 424 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 MS4A18Q3C1V0 323 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 PEAR1Q5VY43 1037 aaPredicted RBP9.11□□□□□ -0.95
TMEM260-211ENST00000556648 ZNF544Q6NX49 715 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 MRPL14Q6P1L8 145 aaKnown RBP9.11□□□□□ -0.95
TMEM260-211ENST00000556648 MTFR2Q6P444 385 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 LRRN1Q6UXK5 716 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 MDGA2Q7Z553 956 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 BMPERQ8N8U9 685 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 SCAIQ8N9R8 606 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 OR6F1Q8NGZ6 308 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 UPRTQ96BW1 309 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 NECAB3Q96P71 396 aaPredicted RBP9.11□□□□□ -0.95
TMEM260-211ENST00000556648 KCNJ15Q99712 375 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 ZCCHC4Q9H5U6 513 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 VSX1Q9NZR4 365 aaPredicted RBP9.11□□□□□ -0.95
TMEM260-211ENST00000556648 KLRF1Q9NZS2 232 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 NUFIP1Q9UHK0 495 aaKnown RBP9.11□□□□□ -0.95
TMEM260-211ENST00000556648 ALPK2Q86TB3 2170 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 COL6A3P12111 3177 aa9.11□□□□□ -0.95
TMEM260-211ENST00000556648 IGKV1D-43A0A0B4J1Z2 117 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 SLC22A23A1A5C7 686 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 OR4C45A6NMZ5 311 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 H3BML4 177 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 MASP2O00187 686 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 ZNF593O00488 134 aaPredicted RBP9.1□□□□□ -0.95
TMEM260-211ENST00000556648 OR6A2O95222 327 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 SPARCP09486 303 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 PRKAR1AP10644 381 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 FGF5P12034 268 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 ADRA2CP18825 462 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 SRMP19623 302 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 TALDO1P37837 337 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 DGCR2P98153 550 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 MFGE8Q08431 387 aaPredicted RBP9.1□□□□□ -0.95
TMEM260-211ENST00000556648 C17orf67Q0P5P2 114 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 GPR176Q14439 515 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 PCOLCEQ15113 449 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 SF3A2Q15428 464 aaKnown RBP9.1□□□□□ -0.95
TMEM260-211ENST00000556648 YIF1BQ5BJH7 314 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 TRIM61Q5EBN2 209 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 MISPQ8IVT2 679 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 ZNF433Q8N7K0 673 aaPredicted RBP9.1□□□□□ -0.95
TMEM260-211ENST00000556648 DNAAF1Q8NEP3 725 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 OR5AK2Q8NH90 309 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 POC1BQ8TC44 478 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 PPP1R14AQ96A00 147 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 RFT1Q96AA3 541 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 ST6GAL2Q96JF0 529 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 DMRTB1Q96MA1 342 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 THAP7Q9BT49 309 aaPredicted RBP9.1□□□□□ -0.95
TMEM260-211ENST00000556648 RBFOX1Q9NWB1 397 aaKnown RBP9.1□□□□□ -0.95
TMEM260-211ENST00000556648 MRPL39Q9NYK5 338 aaKnown RBP9.1□□□□□ -0.95
TMEM260-211ENST00000556648 NPAP1Q9NZP6 1156 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 PPP4R1LQ9P1A2 415 aa9.1□□□□□ -0.95
TMEM260-211ENST00000556648 MYOTQ9UBF9 498 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms