RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 TBC1D3HP0C7X1 549 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 IRF2P14316 349 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 NCK1P16333 377 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 CHRNB2P17787 502 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 GGT1P19440 569 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 MPZP25189 248 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 BRS3P32247 399 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 ACVR1BP36896 505 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 MMP12P39900 470 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 SLC6A8P48029 635 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 SOX2P48431 317 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 PPT1P50897 306 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 CYP2J2P51589 502 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 CTSCP53634 463 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 RAG2P55895 527 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 PIGPP57054 158 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 FOXL2P58012 376 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 BTN3A2P78410 334 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 SLC25A3Q00325 362 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 FMO1Q01740 532 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 TIMM50Q3ZCQ8 353 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 GLYR1Q49A26 553 aaPredicted RBP5.64□□□□□ -1.51
TDP1-215ENST00000556498 ZNF658BQ4V348 819 aaPredicted RBP5.64□□□□□ -1.51
TDP1-215ENST00000556498 SUSD4Q5VX71 490 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 H3F3CQ6NXT2 135 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 GSG1LQ6UXU4 331 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 LARP4Q71RC2 724 aaKnown RBP eCLIP5.64□□□□□ -1.51
TDP1-215ENST00000556498 OTOP2Q7RTS6 562 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 SLC16A9Q7RTY1 509 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 SLC36A1Q7Z2H8 476 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 LAX1Q8IWV1 398 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 LYG1Q8N1E2 194 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 ZCCHC9Q8N567 271 aaKnown RBP5.64□□□□□ -1.51
TDP1-215ENST00000556498 ZNF738Q8NE65 137 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 OR10G3Q8NGC4 313 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 OR4D9Q8NGE8 314 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 OR10X1Q8NGY0 326 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 GRAPLQ8TC17 118 aaPredicted RBP5.64□□□□□ -1.51
TDP1-215ENST00000556498 CNOT9Q92600 299 aaKnown RBP5.64□□□□□ -1.51
TDP1-215ENST00000556498 PYCR2Q96C36 320 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 DTD2Q96FN9 168 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 C12orf42Q96LP6 360 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 TSSK3Q96PN8 268 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 FIZ1Q96SL8 496 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 MECRQ9BV79 373 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 SLC25A18Q9H1K4 315 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 PRO1933Q9H354 126 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 CST9LQ9H4G1 147 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 WFDC1Q9HC57 220 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 LYRM4Q9HD34 91 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 MYOZ2Q9NPC6 264 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 LYRM2Q9NU23 88 aaPredicted RBP5.64□□□□□ -1.51
TDP1-215ENST00000556498 PTGFRNQ9P2B2 879 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 FARSAQ9Y285 508 aaKnown RBP5.64□□□□□ -1.51
TDP1-215ENST00000556498 AMDHD2Q9Y303 409 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 MYH1P12882 1939 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 ASXL1Q8IXJ9 1541 aa5.64□□□□□ -1.51
TDP1-215ENST00000556498 MYO3AQ8NEV4 1616 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 IQGAP1P46940 1657 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 UBR1Q8IWV7 1749 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 IGHV2-70DA0A0C4DH43 119 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 A0A1W2PR48 441 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 C17orf102A2RUQ5 167 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 MBLAC1A4D2B0 266 aaPredicted RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 PPP5D1E7EU14 171 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 CORTO00230 105 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 PHOX2AO14813 284 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 RAB29O14966 203 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 SIVA1O15304 175 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 CCL25O15444 150 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 LDB2O43679 373 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 LRP3O75074 770 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 SEMA7AO75326 666 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 KNG1P01042 644 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 HLA-DQB1P01920 261 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 CST2P09228 141 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 SNRPCP09234 159 aaKnown RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 PCMT1P22061 227 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 IGFBP6P24592 240 aaPredicted RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 CD27P26842 260 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 S100A7P31151 101 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 GKP32189 559 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 CHI3L1P36222 383 aaPredicted RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 PIGAP37287 484 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 COILP38432 576 aaPredicted RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 ID1P41134 155 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 VIPR2P41587 438 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 GEMP55040 296 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 SESN2P58004 480 aaPredicted RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 HMGCS1Q01581 520 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 MXD1Q05195 221 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 BAXQ07812 192 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 CRHR2Q13324 411 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 RHEBQ15382 184 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 ZXDCQ2QGD7 858 aaPredicted RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 MORN2Q502X0 79 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 ARL13AQ5H913 290 aaPredicted RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 PHF19Q5T6S3 580 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 TMEM244Q5VVB8 128 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 ZNF770Q6IQ21 691 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms