RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CALML5Q9NZT1 146 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 P2RX2Q9UBL9 471 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 TESQ9UGI8 421 aaKnown RBP11.82□□□□□ -0.52
ACTN1-219ENST00000556432 ZNF232Q9UNY5 417 aa11.82□□□□□ -0.52
ACTN1-219ENST00000556432 IGHV3OR16-10A0A075B7F0 116 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 E9PBE3 544 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 CLDN34H7C241 214 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 SPRY3O43610 288 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 HPRP00739 348 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 BCHEP06276 602 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 HLA-DOBP13765 273 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 ZNF250P15622 560 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 ARRB2P32121 409 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 ZNF81P51508 661 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 SLC3A1Q07837 685 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 ZNF154Q13106 437 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 DPY19L1Q2PZI1 675 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 RPS26P11Q5JNZ5 115 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-219ENST00000556432 KLF17Q5JT82 389 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-219ENST00000556432 RNF220Q5VTB9 566 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 ZNF627Q7L945 461 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 ZNF584Q8IVC4 421 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 IFT20Q8IY31 132 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 PAQR4Q8N4S7 273 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-219ENST00000556432 CPEB3Q8NE35 698 aaKnown RBP11.81□□□□□ -0.52
ACTN1-219ENST00000556432 ZNF519Q8TB69 540 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 EPS8L3Q8TE67 593 aaKnown RBP11.81□□□□□ -0.52
ACTN1-219ENST00000556432 WFDC12Q8WWY7 111 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 APOPT1Q96IL0 206 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 LRR1Q96L50 414 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 AKTIPQ9H8T0 292 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 RNF121Q9H920 327 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 MMP26Q9NRE1 261 aa11.81□□□□□ -0.52
ACTN1-219ENST00000556432 LEF1Q9UJU2 399 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-219ENST00000556432 IGLV3-9A0A075B6K5 115 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 TRAV36DV7A0A075B6V5 113 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 PPIAL4EA0A075B759 164 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 PPIAL4CA0A0B4J2A2 164 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 PPIAL4DF5H284 164 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 TIMM23O14925 209 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 ENTPD5O75356 428 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 CRYBA1P05813 215 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 PPIAL4FP0DN26 164 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 SERPINB5P36952 375 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 CSNK1A1P48729 337 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 CRISP3P54108 245 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 NME5P56597 212 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 PMS2P3Q13401 168 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 TBC1D28Q2M2D7 210 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 SMU1Q2TAY7 513 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 TMEM53Q6P2H8 277 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 C16orf87Q6PH81 154 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 JAZF1Q86VZ6 243 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 SKA3Q8IX90 412 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 KIR3DL3Q8N743 410 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 FGFBP3Q8TAT2 258 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 UBLCP1Q8WVY7 318 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-219ENST00000556432 TXNDC15Q96J42 360 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 SPATA9Q9BWV2 254 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 ASPNQ9BXN1 380 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 EGLN1Q9GZT9 426 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 BEX1Q9HBH7 125 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 TNFRSF19Q9NS68 423 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 SLC17A7Q9P2U7 560 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 BTNL2Q9UIR0 455 aa11.8□□□□□ -0.52
ACTN1-219ENST00000556432 A0A1B0GUS0 222 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 LOC102725191A0A1B0GVB3 256 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 PLSCR5A0PG75 271 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 TMEM247A6NEH6 219 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 KRT75O95678 551 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 IGHMP01871 453 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 SBK2P0C263 348 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 AHCYP23526 432 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 CDKN2CP42773 168 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 CRATP43155 626 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 TUSC1Q2TAM9 212 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 FAM209AQ5JX71 171 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 C5orf46Q6UWT4 87 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 PIWIL3Q7Z3Z3 882 aaKnown RBP11.79□□□□□ -0.52
ACTN1-219ENST00000556432 NET1Q7Z628 596 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-219ENST00000556432 C10orf53Q8N6V4 93 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 ADPRHL1Q8NDY3 354 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 OR52E2Q8NGJ4 325 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 OR4F5Q8NH21 305 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 DCLRE1CQ96SD1 692 aaKnown RBP11.79□□□□□ -0.52
ACTN1-219ENST00000556432 SH3GL3Q99963 347 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 BCL2L14Q9BZR8 327 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 LRMDAQ9H2I8 198 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 KLHL14Q9P2G3 628 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 MMP24Q9Y5R2 645 aa11.79□□□□□ -0.52
ACTN1-219ENST00000556432 A0A087WUJ7 227 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 MS4A18H0YCH9 400 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 ZNF500O60304 480 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-219ENST00000556432 SPAG7O75391 227 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 FARS2O95363 451 aaKnown RBP11.78□□□□□ -0.52
ACTN1-219ENST00000556432 IGHV1-46P01743 117 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 ETFAP13804 333 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 UCP2P55851 309 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 RAG2P55895 527 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 PUDPQ08623 228 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms