RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 RAD51DO75771 328 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 KRT36O76013 467 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 F13BP05160 661 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 HOXB6P17509 224 aaKnown RBP8.45□□□□□ -1.06
SRP54-210ENST00000556380 GPR4P46093 362 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 SLC9A3P48764 834 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 RASSF2P50749 326 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 BIDP55957 195 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 ARF1P84077 181 aaKnown RBP8.45□□□□□ -1.06
SRP54-210ENST00000556380 ROR2Q01974 943 aaKnown RBP8.45□□□□□ -1.06
SRP54-210ENST00000556380 TGFBR3Q03167 851 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 CAMK2DQ13557 499 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 PPA1Q15181 289 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 ACKR1Q16570 336 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 HIST3H3Q16695 136 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 ANKDD1AQ495B1 522 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 HIKESHIQ53FT3 197 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 FGD3Q5JSP0 725 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 C1QTNF12Q5T7M4 302 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 ZNF627Q7L945 461 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 SSX8Q7RTT4 187 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 ABHD12BQ7Z5M8 362 aaPredicted RBP8.45□□□□□ -1.06
SRP54-210ENST00000556380 WFDC8Q8IUA0 241 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 C17orf78Q8N4C9 275 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 OR4K5Q8NGD3 323 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 OR4C15Q8NGM1 316 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 OR1K1Q8NGR3 316 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 OR13C2Q8NGS9 318 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 OR52J3Q8NH60 311 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 OR51A7Q8NH64 312 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 MAGEE2Q8TD90 523 aaPredicted RBP8.45□□□□□ -1.06
SRP54-210ENST00000556380 CANT1Q8WVQ1 401 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 ASB10Q8WXI3 467 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 NRGNQ92686 78 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 NMD3Q96D46 503 aaKnown RBP8.45□□□□□ -1.06
SRP54-210ENST00000556380 SLC25A44Q96H78 314 aaPredicted RBP8.45□□□□□ -1.06
SRP54-210ENST00000556380 ADAD1Q96M93 576 aaKnown RBP8.45□□□□□ -1.06
SRP54-210ENST00000556380 POLDIP3Q9BY77 421 aaKnown RBP8.45□□□□□ -1.06
SRP54-210ENST00000556380 LRMDAQ9H2I8 198 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 CRLF2Q9HC73 371 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 INIPQ9NRY2 104 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 NPAP1Q9NZP6 1156 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 SLC7A8Q9UHI5 535 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 TMEM5Q9Y2B1 443 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 HIVEP1P15822 2718 aa8.45□□□□□ -1.06
SRP54-210ENST00000556380 TRAV27A0A087WT01 109 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 ELOA3CA0A087WX78 387 aaPredicted RBP8.44□□□□□ -1.06
SRP54-210ENST00000556380 TCRBV3S1A0A5B6 114 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 CENPBD1B2RD01 187 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 M0R3G1 203 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 SERPINI2O75830 405 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 GADD45GO95257 159 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 BCL10O95999 233 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 PLAUP00749 431 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 IGHMP01871 453 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 PGA4P0DJD7 388 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 PGA3P0DJD8 388 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 SAGP10523 405 aaPredicted RBP8.44□□□□□ -1.06
SRP54-210ENST00000556380 RRM2P31350 389 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 GSSP48637 474 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 CSNK1A1P48729 337 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 ZNF133P52736 654 aaPredicted RBP8.44□□□□□ -1.06
SRP54-210ENST00000556380 SH3BGRP55822 239 aaPredicted RBP8.44□□□□□ -1.06
SRP54-210ENST00000556380 FXYD6P3P58550 94 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 SPIBQ01892 262 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 CHRNB3Q05901 458 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 STK11Q15831 433 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 CEACAM16Q2WEN9 425 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 TBRG1Q3YBR2 411 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 ZBED5Q49AG3 693 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 FAM98BQ52LJ0 330 aaKnown RBP8.44□□□□□ -1.06
SRP54-210ENST00000556380 ALG10Q5BKT4 473 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 NCMAPQ5T1S8 102 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 CARD17Q5XLA6 110 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 ZNF770Q6IQ21 691 aaPredicted RBP8.44□□□□□ -1.06
SRP54-210ENST00000556380 HMBOX1Q6NT76 420 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 ANKRD16Q6P6B7 361 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 ASRGL1Q7L266 308 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 OAFQ86UD1 273 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 TMEM200AQ86VY9 491 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 CDK20Q8IZL9 346 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 GPR137CQ8N3F9 429 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 PAPD5Q8NDF8 572 aaKnown RBP8.44□□□□□ -1.06
SRP54-210ENST00000556380 SLCO4A1Q96BD0 722 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 MUCL1Q96DR8 90 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 PIK3IP1Q96FE7 263 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 PLPPR2Q96GM1 343 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 FAM46AQ96IP4 442 aaKnown RBP8.44□□□□□ -1.06
SRP54-210ENST00000556380 ALPK1Q96QP1 1244 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 CHID1Q9BWS9 393 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 TRIM15Q9C019 465 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 TXNIPQ9H3M7 391 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 LIME1Q9H400 295 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 VNN3Q9NY84 501 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 GLTPQ9NZD2 209 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 SIGLEC7Q9Y286 467 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 LYVE1Q9Y5Y7 322 aa8.44□□□□□ -1.06
SRP54-210ENST00000556380 ARPC4-TTLL3A0A0A6YYG9 625 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 A0A1W2PR80 420 aa8.43□□□□□ -1.06
SRP54-210ENST00000556380 A0A1W2PRG6 482 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms