RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 GNGT1P63211 74 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 ARF1P84077 181 aaKnown RBP5.79□□□□□ -1.48
ATXN3-236ENST00000556220 ZNF154Q13106 437 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 GLIPR1L2Q4G1C9 344 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 ATP6AP1LQ52LC2 224 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 ZNF678Q5SXM1 525 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 ZCCHC23Q6ZST2 131 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 C9orf139Q6ZV77 190 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 EIF3MQ7L2H7 374 aaKnown RBP5.79□□□□□ -1.48
ATXN3-236ENST00000556220 MDP1Q86V88 176 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 CCDC36Q8IYA8 594 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 TMEM99Q8N816 258 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 ANKRD42Q8N9B4 389 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 GLB1L3Q8NCI6 653 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-236ENST00000556220 MRAPQ8TCY5 172 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 GTF3AQ92664 365 aaKnown RBP5.79□□□□□ -1.48
ATXN3-236ENST00000556220 PMM1Q92871 262 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 RAB1CQ92928 201 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 DDIT4LQ96D03 193 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 APOPT1Q96IL0 206 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 ALKBH3Q96Q83 286 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-236ENST00000556220 SDF2Q99470 211 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 ACTRT3Q9BYD9 372 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 MRPL46Q9H2W6 279 aaKnown RBP5.79□□□□□ -1.48
ATXN3-236ENST00000556220 REEP4Q9H6H4 257 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 SIRT3Q9NTG7 399 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-236ENST00000556220 C1RLQ9NZP8 487 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 KCNE5Q9UJ90 142 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 PURGQ9UJV8 347 aaKnown RBP5.79□□□□□ -1.48
ATXN3-236ENST00000556220 ZNF346Q9UL40 294 aaKnown RBP5.79□□□□□ -1.48
ATXN3-236ENST00000556220 PCDHGB4Q9UN71 923 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 FAF1Q9UNN5 650 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-236ENST00000556220 NOX1Q9Y5S8 564 aa5.79□□□□□ -1.48
ATXN3-236ENST00000556220 DNAH1Q9P2D7 4330 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 DSPPQ9NZW4 1301 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 NUP214P35658 2090 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-236ENST00000556220 IGHV1-69-2A0A0G2JMI3 117 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 TMEM72A0PK05 275 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 WDR91A4D1P6 747 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 C5orf63A6NC05 138 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 AQP7P3A6NL99 342 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 C17orf100A8MU93 164 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 CLDN25C9JDP6 229 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 UGT2B17O75795 530 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 RSL1D1O76021 490 aaKnown RBP5.78□□□□□ -1.48
ATXN3-236ENST00000556220 CLPXO76031 633 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 SEC14L2O76054 403 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 AKR7A3O95154 331 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 KRT16P08779 473 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 SNRPAP09012 282 aaKnown RBP5.78□□□□□ -1.48
ATXN3-236ENST00000556220 ZNF12P17014 697 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 BGNP21810 368 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 RYKP34925 604 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 CRHR1P34998 444 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 PGM1P36871 562 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 HTR3AP46098 478 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 CCT3P49368 545 aaKnown RBP5.78□□□□□ -1.48
ATXN3-236ENST00000556220 P2RY4P51582 365 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 SLC18A1P54219 525 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 PKNOX1P55347 436 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 RPS23P62266 143 aaKnown RBP5.78□□□□□ -1.48
ATXN3-236ENST00000556220 CCL8P80075 99 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 ROR2Q01974 943 aaKnown RBP5.78□□□□□ -1.48
ATXN3-236ENST00000556220 IFFO1Q0D2I5 559 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 KIAA0040Q15053 153 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 GPR68Q15743 365 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 FAM189A2Q15884 450 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 IMPG1Q17R60 797 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 PCGF3Q3KNV8 242 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 GKAP1Q5VSY0 366 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-236ENST00000556220 AP1ARQ63HQ0 302 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 NIPAL3Q6P499 406 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 C6orf89Q6UWU4 347 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 CREB3L2Q70SY1 520 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 PIGWQ7Z7B1 504 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 GPAT4Q86UL3 456 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 CMIPQ8IY22 773 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 ST7LQ8TDW4 575 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 PPCDCQ96CD2 204 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 ZNF503Q96F45 646 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 THOC1Q96FV9 657 aaKnown RBP5.78□□□□□ -1.48
ATXN3-236ENST00000556220 TIMD4Q96H15 378 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 METTL2AQ96IZ6 378 aaKnown RBP5.78□□□□□ -1.48
ATXN3-236ENST00000556220 KCNA7Q96RP8 456 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 GAL3ST1Q99999 423 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 LINC00470Q9BZP3 86 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 TSPYL1Q9H0U9 437 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 SERHL2Q9H4I8 314 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 PRDM13Q9H4Q3 707 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 MSL2Q9HCI7 577 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 TCF7L1Q9HCS4 588 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 HINT3Q9NQE9 182 aaKnown RBP5.78□□□□□ -1.48
ATXN3-236ENST00000556220 B3GNT2Q9NY97 397 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 NKIRAS2Q9NYR9 191 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 TAAR3PQ9P1P4 343 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 FZR1Q9UM11 496 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 OAZ3Q9UMX2 235 aa5.78□□□□□ -1.48
ATXN3-236ENST00000556220 SOX21Q9Y651 276 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-236ENST00000556220 TMED7-TICAM2A0A0A6YYA0 188 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 CENPVL1A0A0U1RR11 272 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms