RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 TRBV4-1A0A0J9YWV2 114 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 CDC42EP2O14613 210 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 TRMUO75648 421 aaKnown RBP13.25□□□□□ -0.29
ACTN1-217ENST00000556203 B4GALT1P15291 398 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 PAX7P23759 505 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 CAPZA2P47755 286 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 SLC9A3P48764 834 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 CLRN1P58418 232 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 TOP3AQ13472 1001 aaPredicted RBP13.25□□□□□ -0.29
ACTN1-217ENST00000556203 FHL1Q13642 323 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 ARMC4Q5T2S8 1044 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 LRFN4Q6PJG9 635 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 IGFN1Q86VF2 1251 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 DEPDC4Q8N2C3 294 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 LRRC75AQ8NAA5 344 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 NOXO1Q8NFA2 376 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 SMAP2Q8WU79 429 aaPredicted RBP13.25□□□□□ -0.29
ACTN1-217ENST00000556203 TMEM171Q8WVE6 324 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 FAM46AQ96IP4 442 aaKnown RBP13.25□□□□□ -0.29
ACTN1-217ENST00000556203 CLPTM1LQ96KA5 538 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 SLC38A2Q96QD8 506 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 TNFRSF13CQ96RJ3 184 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 MUC13Q9H3R2 512 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 LAMP3Q9UQV4 416 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 TMEM5Q9Y2B1 443 aa13.25□□□□□ -0.29
ACTN1-217ENST00000556203 ANKRD17O75179 2603 aaKnown RBP13.25□□□□□ -0.29
ACTN1-217ENST00000556203 MYO9AB2RTY4 2548 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 ZNF503-AS2A6NEH8 195 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 ATP6V1G2-DDX39BF2Z307 99 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 SOD3P08294 240 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 QDPRP09417 244 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 ACADSP16219 412 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 OMPP47874 163 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 SMIM11AP58511 58 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 CTXN1P60606 82 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 MS4A2Q01362 244 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 TRIM25Q14258 630 aaKnown RBP13.24□□□□□ -0.29
ACTN1-217ENST00000556203 SEC23BQ15437 767 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 PGGHGQ32M88 737 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 ANKDD1AQ495B1 522 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 B3GLCTQ6Y288 498 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 TMPRSS11FQ6ZWK6 438 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 ZNF627Q7L945 461 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 DHFR2Q86XF0 187 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 ZDHHC21Q8IVQ6 265 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 CCDC36Q8IYA8 594 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 SYT14Q8NB59 555 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 OR4K5Q8NGD3 323 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 IGFBPL1Q8WX77 278 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 CCDC124Q96CT7 223 aaKnown RBP13.24□□□□□ -0.29
ACTN1-217ENST00000556203 ZNF347Q96SE7 839 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 SEPHS2Q99611 448 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 THTPAQ9BU02 230 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 MRPL13Q9BYD1 178 aaKnown RBP13.24□□□□□ -0.29
ACTN1-217ENST00000556203 TXNIPQ9H3M7 391 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 CXorf56Q9H5V9 222 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 MOV10Q9HCE1 1003 aaKnown RBP13.24□□□□□ -0.29
ACTN1-217ENST00000556203 IL1RAPQ9NPH3 570 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 KRCC1Q9NPI7 259 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-217ENST00000556203 STX18Q9P2W9 335 aaKnown RBP13.24□□□□□ -0.29
ACTN1-217ENST00000556203 CRNNQ9UBG3 495 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-217ENST00000556203 ATP23Q9Y6H3 246 aa13.24□□□□□ -0.29
ACTN1-217ENST00000556203 AKAP9Q99996 3911 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 HRNRQ86YZ3 2850 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-217ENST00000556203 TCRBV5S2A0A599 114 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 NPIPB13A6NJU9 1138 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 CENPBD1B2RD01 187 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 NPIPB4C9JG80 1138 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 E7EQL1 145 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 DHHO43323 396 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 GADD45GO95257 159 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 IGKV3-15P01624 115 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 IGLV1-44P01699 117 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 HLA-HP01893 362 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 CELA3BP08861 270 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 CECR9P0C854 216 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 DANCRP0C864 163 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 CD79AP11912 226 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 CBR1P16152 277 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 RRM2P31350 389 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 LIMS1P48059 325 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 RPL27P61353 136 aaKnown RBP13.23□□□□□ -0.29
ACTN1-217ENST00000556203 MYBPC1Q00872 1141 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 NPRL3Q12980 569 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 TAF11Q15544 211 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 HIST3H3Q16695 136 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 ZBED5Q49AG3 693 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 MTX3Q5HYI7 312 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 LCN8Q6JVE9 175 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 MDP1Q86V88 176 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 LRRC75A-AS1Q8N1F1 130 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 FAM169BQ8N8A8 192 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 HDAC2Q92769 488 aaKnown RBP13.23□□□□□ -0.29
ACTN1-217ENST00000556203 MCHR2Q969V1 340 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 ASB9Q96DX5 294 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 PERPQ96FX8 193 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 TSPAN32Q96QS1 320 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 KCNS3Q9BQ31 491 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 FUZQ9BT04 418 aa13.23□□□□□ -0.29
ACTN1-217ENST00000556203 SEC61A2Q9H9S3 476 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms