RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 TOP3AQ13472 1001 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-221ENST00000555773 KRR1Q13601 381 aaKnown RBP11.04□□□□□ -0.64
SHMT2-221ENST00000555773 KEAP1Q14145 624 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 MELKQ14680 651 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 HIST3H3Q16695 136 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 ZNF362Q5T0B9 420 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-221ENST00000555773 THEM4Q5T1C6 240 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 SLC35F1Q5T1Q4 408 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 TMEM236Q5W0B7 351 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 C12orf73Q69YU5 71 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 CASP12Q6UXS9 341 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 BTLAQ7Z6A9 289 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 FJX1Q86VR8 437 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 JAZF1Q86VZ6 243 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 C20orf196Q8IYI0 205 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 TMEM123Q8N131 208 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 NAXEQ8NCW5 288 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 OR6N1Q8NGY5 312 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 ASB5Q8WWX0 329 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 PLEKHA8Q96JA3 519 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 KCNK17Q96T54 332 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 B3GAT2Q9NPZ5 323 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 TVP23BQ9NYZ1 205 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 GLTPQ9NZD2 209 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 COQ3Q9NZJ6 369 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 PROCRQ9UNN8 238 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 SLC5A6Q9Y289 635 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 ALPK2Q86TB3 2170 aa11.04□□□□□ -0.64
SHMT2-221ENST00000555773 MSTNO14793 375 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 SURF4O15260 269 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 RENP00797 406 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 PGA4P0DJD7 388 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 PGA3P0DJD8 388 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 AGAP20933 346 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 CHRNB4P30926 498 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 GGT2P36268 569 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 CDKN2AP42771 156 aaKnown RBP11.03□□□□□ -0.64
SHMT2-221ENST00000555773 CSNK1A1P48729 337 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 CLRN1P58418 232 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 ADARB1P78563 741 aaKnown RBP11.03□□□□□ -0.64
SHMT2-221ENST00000555773 EFNB1P98172 346 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 RUNX1T1Q06455 604 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 ITGADQ13349 1161 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 CAMK2DQ13557 499 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 STK11Q15831 433 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 SNAPC1Q16533 368 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 MESTQ5EB52 335 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 FBXW9Q5XUX1 488 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 ABHD12BQ7Z5M8 362 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-221ENST00000555773 DEPDC4Q8N2C3 294 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 GPR137CQ8N3F9 429 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 IQCF1Q8N6M8 205 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 OR52E2Q8NGJ4 325 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 OR4K13Q8NH42 304 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 TFAP2CQ92754 450 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 HDAC2Q92769 488 aaKnown RBP11.03□□□□□ -0.64
SHMT2-221ENST00000555773 TMEM54Q969K7 222 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 RASD2Q96D21 266 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 DDOQ99489 341 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 PITX2Q99697 317 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 ADI1Q9BV57 179 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 SLCO5A1Q9H2Y9 848 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 FN3KQ9H479 309 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 VSX1Q9NZR4 365 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-221ENST00000555773 UPB1Q9UBR1 384 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 FOXD3Q9UJU5 478 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-221ENST00000555773 RNF6Q9Y252 685 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 GMPPBQ9Y5P6 360 aa11.03□□□□□ -0.64
SHMT2-221ENST00000555773 SLC22A23A1A5C7 686 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 RPL36A-HNRNPH2H7BZ11 118 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 M0R3G1 203 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 MPZL2O60487 215 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 KRT33AO76009 404 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF3P17036 446 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 PAICSP22234 425 aaKnown RBP11.02□□□□□ -0.65
SHMT2-221ENST00000555773 CRABP1P29762 137 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 CAPGP40121 348 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 PCYT1AP49585 367 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF133P52736 654 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-221ENST00000555773 AQP4P55087 323 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.02□□□□□ -0.65
SHMT2-221ENST00000555773 IL18R1Q13478 541 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 SLC25A35Q3KQZ1 300 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 TSPO2Q5TGU0 170 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 CARD17Q5XLA6 110 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 LEG1Q6P5S2 330 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 VWA1Q6PCB0 445 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 XKRXQ6PP77 449 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 IZUMO2Q6UXV1 221 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 TFAP2EQ6VUC0 442 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 BEND4Q6ZU67 534 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 CCDC71Q8IV32 467 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-221ENST00000555773 NPEPL1Q8NDH3 523 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 NOXO1Q8NFA2 376 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 OR8J1Q8NGP2 316 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 LILRB4Q8NHJ6 448 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 CYGBQ8WWM9 190 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 NMD3Q96D46 503 aaKnown RBP11.02□□□□□ -0.65
SHMT2-221ENST00000555773 CCDC120Q96HB5 630 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 NMNAT3Q96T66 252 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms