RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 GUCY1A3Q02108 690 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 PIGFQ07326 219 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 SNTB2Q13425 540 aaKnown RBP11.95□□□□□ -0.5
PCNX4-209ENST00000555569 DAG1Q14118 895 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 MELKQ14680 651 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 KRT80Q6KB66 452 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 DEF8Q6ZN54 512 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 SPATA21Q7Z572 469 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 NANOGNBQ7Z5D8 188 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 NKAIN4Q8IVV8 208 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 ANKS4BQ8N8V4 417 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 ZNF566Q969W8 418 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 SLC25A44Q96H78 314 aaPredicted RBP11.95□□□□□ -0.5
PCNX4-209ENST00000555569 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 ZNF75AQ96N20 296 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 POLR2J2Q9GZM3 115 aaKnown RBP11.95□□□□□ -0.5
PCNX4-209ENST00000555569 POLR2J3Q9H1A7 115 aaKnown RBP11.95□□□□□ -0.5
PCNX4-209ENST00000555569 DENND2DQ9H6A0 471 aaPredicted RBP11.95□□□□□ -0.5
PCNX4-209ENST00000555569 CCDC134Q9H6E4 229 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 MYOZ1Q9NP98 299 aaPredicted RBP11.95□□□□□ -0.5
PCNX4-209ENST00000555569 GLTPQ9NZD2 209 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 RIMS3Q9UJD0 308 aa11.95□□□□□ -0.5
PCNX4-209ENST00000555569 ANK3Q12955 4377 aaKnown RBP11.95□□□□□ -0.5
PCNX4-209ENST00000555569 ATRQ13535 2644 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 A8MV72 311 aaPredicted RBP11.94□□□□□ -0.5
PCNX4-209ENST00000555569 BLOC1S5-TXNDC5H3BN57 136 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 NDUFS8O00217 210 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 SLC22A2O15244 555 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 OR7A10O76100 309 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 UBL3O95164 117 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 OR5F1O95221 314 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 BCL10O95999 233 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 MT-ND1P03886 318 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 ZNF14P17017 642 aaPredicted RBP11.94□□□□□ -0.5
PCNX4-209ENST00000555569 USF1P22415 310 aaPredicted RBP11.94□□□□□ -0.5
PCNX4-209ENST00000555569 NR4A1P22736 598 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 RBM34P42696 430 aaKnown RBP11.94□□□□□ -0.5
PCNX4-209ENST00000555569 PTDSS1P48651 473 aaKnown RBP11.94□□□□□ -0.5
PCNX4-209ENST00000555569 UGT2B15P54855 530 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 CARTPTQ16568 116 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 LRRC23Q53EV4 343 aaPredicted RBP11.94□□□□□ -0.5
PCNX4-209ENST00000555569 CYBRD1Q53TN4 286 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 C6orf52Q5T4I8 152 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 PIWIL3Q7Z3Z3 882 aaKnown RBP11.94□□□□□ -0.5
PCNX4-209ENST00000555569 SVOPLQ8N434 492 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 OR2T12Q8NG77 320 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 PFN4Q8NHR9 129 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 RCN3Q96D15 328 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 SGTBQ96EQ0 304 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 DOK1Q99704 481 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 PIMREGQ9BSJ6 248 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 RAB1BQ9H0U4 201 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 ZNF224Q9NZL3 707 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 CMAHPQ9Y471 501 aa11.94□□□□□ -0.5
PCNX4-209ENST00000555569 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.93□□□□□ -0.57e-13■■■■■ 37.9
PCNX4-209ENST00000555569 LOC390937A0A1W2PQ73 354 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 TMEM129A0AVI4 362 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 VWC2LB2RUY7 222 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 DHHO43323 396 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 ENTPD5O75356 428 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 RAB36O95755 333 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 IGF2P01344 180 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 IGHG1P01857 330 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 PGA4P0DJD7 388 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 PGA3P0DJD8 388 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 FUT1P19526 365 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 KDELR2P33947 212 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 NR4A2P43354 598 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 OR1E2P47887 323 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 GIPRP48546 466 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 RAB1AP62820 205 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 LSM11P83369 360 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCNX4-209ENST00000555569 RPL18Q07020 188 aaKnown RBP11.93□□□□□ -0.5
PCNX4-209ENST00000555569 PIN1Q13526 163 aaPredicted RBP11.93□□□□□ -0.5
PCNX4-209ENST00000555569 HSP90B2PQ58FF3 399 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 LRFN4Q6PJG9 635 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 HIPK1Q86Z02 1210 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 SKA3Q8IX90 412 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 MICU2Q8IYU8 434 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 POU5F2Q8N7G0 328 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 TMEM255BQ8WV15 326 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 TMEM239Q8WW34 195 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 DYNLRB1Q9NP97 96 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 ARMCX1Q9P291 453 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 FBXL3Q9UKT7 428 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 AP3M1Q9Y2T2 418 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 SPEF1Q9Y4P9 236 aa11.93□□□□□ -0.5
PCNX4-209ENST00000555569 A0A1W2PRG6 482 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 ELOVL7A1L3X0 281 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 SH3PXD2BA1X283 911 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 MCIDASD6RGH6 385 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 F13BP05160 661 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 ERCC1P07992 297 aaPredicted RBP11.92□□□□□ -0.5
PCNX4-209ENST00000555569 QDPRP09417 244 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 PATE4P0C8F1 98 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 OR8G3PP0DMU2 310 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 IGHV4-31P0DP07 118 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 THRBP10828 461 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 ZNF35P13682 527 aa11.92□□□□□ -0.5
PCNX4-209ENST00000555569 CLRN1P58418 232 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms